Vallitalea guaymasensis: HYG85_04220
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Entry
HYG85_04220 CDS
T07172
Symbol
pcrA
Name
(GenBank) DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
vgu
Vallitalea guaymasensis
Pathway
vgu03420
Nucleotide excision repair
vgu03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
vgu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
HYG85_04220 (pcrA)
03430 Mismatch repair
HYG85_04220 (pcrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vgu03400
]
HYG85_04220 (pcrA)
Enzymes [BR:
vgu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
HYG85_04220 (pcrA)
DNA repair and recombination proteins [BR:
vgu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
HYG85_04220 (pcrA)
MMR (mismatch excision repair)
Other MMR factors
HYG85_04220 (pcrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
Viral_helicase1
AAA_30
AAA_11
AAA_12
ResIII
DUF3553
CarD_TRCF_RID
Motif
Other DBs
NCBI-ProteinID:
QUH28160
UniProt:
A0A8J8M8J9
LinkDB
All DBs
Position
complement(945241..947460)
Genome browser
AA seq
739 aa
AA seq
DB search
MDKRYDSLNKEQKKAVLHTEGPLLILAGAGSGKTRVLTHRIAYLIEEKKVAPWNILAITF
TNKAAKEMRERVDNLVGSGSEDIWVSTFHSTCVKILRRHIDKIGYDRYFTIYDTDDQKKL
IRDCMKQLNVDPKQFKENSILSSISSAKDKLLTPKKFEKQAYEYRDQVVSKVYTMYQDRL
KKNNALDFDDLLVKTVEVFRLCPDVLSYYQDKFKYIMVDEYQDTNHVQYIFVGLLASRYK
NLCVVGDDDQSIYRFRGADISNILDFEKDFRNAEVIKLEQNYRSSKNILEAANQVISNNY
GRKNKTLYTDNESGDLINYRCLQNEQAEAEFMAGEIIKGIESEGRDFKDYAILYRTNAQS
RVIEERFILNNIPYKIVGGTSFYQRKEIKDILAYLKTINNSTDDIAVKRIINVPRRGIGT
TTINKVENYAYNNDVNFFDALCEVSQIPNMTRSSKKVEAFTHFIRTLRVEMATMSLVDLT
NEVIERTGYVKELEAEGTDEAHGRIDNIGELISKLTEYENNEEEPTLNGFLEEVALIADI
DNYNEETNVVVLMTMHSAKGLEFPCVFISGMEDGLFPSYMSISSGQQEDIEEERRLCYVG
ITRAKQKLYLLGANSRMIRGMTQYNQVSRFIREINNELFDLEYTKPIQDMPNEKTSFRKN
AHSFLKSNPYVVKKNANKMPAPGDFTLNYEVGDLVKHMKFGIGEVLAIQPGGADYEVTVN
FPSAGVKKLMARLANLKKA
NT seq
2220 nt
NT seq
+upstream
nt +downstream
nt
atggataaaagatatgactctttgaataaggaacagaaaaaagcagtattacatacagag
ggccccttgcttatattagctggagcaggatcaggaaaaacaagagtattgacacatagg
atagcttatctcatagaagagaagaaagtagctccttggaatattcttgcaatcactttt
accaacaaagcagctaaagagatgagagaaagagtagacaaccttgtgggctctggaagt
gaggatatatgggtaagtacgttccactccacatgtgttaagatactaagacgtcatatt
gataaaataggatatgaccgatattttactatatatgatactgatgaccagaaaaaatta
atccgtgactgcatgaaacagcttaatgttgaccctaagcagttcaaagaaaatagtatt
ctaagcagtataagttctgcaaaagataaattgcttactcctaaaaaatttgaaaaacaa
gcttatgaatacagggatcaagtagtatcaaaagtatatacaatgtatcaggataggctt
aagaagaacaatgcacttgattttgatgacctgttagtaaagacggttgaagtcttcagg
ctttgcccagatgtactatcatattatcaggataagtttaaatacataatggtggatgaa
tatcaagataccaaccatgtgcaatatatttttgtaggtctactggcaagcagatacaaa
aatctatgtgttgttggtgatgatgaccagtctatctacagattccgtggtgctgatatt
agtaacatacttgattttgaaaaagattttagaaacgctgaagtcataaaacttgagcag
aactatcgttcttcaaaaaatattctagaagctgctaatcaagtaatcagtaataactat
ggcagaaaaaataagaccctctatacagataatgaatcaggagatttgattaattataga
tgccttcagaatgaacaagctgaagcagagttcatggctggtgagataataaaaggcatt
gaatcagaaggcagagatttcaaggattacgcaatcctatatagaaccaatgctcaatca
cgtgttattgaggaaagattcatacttaacaatataccttataaaatcgtgggtggtaca
tctttctatcaaagaaaagaaataaaagatatcttagcatatcttaaaactataaataac
agtacagatgatatagctgtaaaaagaataataaatgttccaagaagaggaattggtaca
acaacaattaataaagtagaaaattatgcatataataatgatgtgaatttcttcgacgca
ctttgtgaagtgagccagataccaaatatgacacgttcttctaagaaagtggaagcattt
acccattttatcagaacattaagagttgagatggcaaccatgagtctagttgatttaacc
aatgaagttattgagaggacaggttatgtcaaagagcttgaagcggaaggtactgatgag
gcacatggaagaattgacaatattggagaattgatttccaagttaactgaatatgagaat
aacgaagaggaaccaaccttaaatggtttcttggaggaagtagcccttatagctgatata
gataactataatgaagagacaaatgttgttgttcttatgactatgcatagcgctaaaggc
ttagaattcccttgcgttttcatttctggtatggaagatggtctgttccctagctatatg
agcatatcttcaggacaacaagaggatattgaagaagaaagaagattatgctatgtaggt
attacaagagctaaacagaaactatatctcttaggtgctaattctagaatgattagaggt
atgactcaatataatcaagtatcaagattcattagagagataaataatgagctatttgat
ctagagtacacaaaaccaatacaggacatgcctaatgagaaaaccagttttagaaaaaat
gctcatagtttcttgaagtccaatccatatgtggttaaaaagaacgcaaataagatgcca
gctcctggagactttacccttaactatgaagtaggggatttagtcaaacatatgaaattt
ggtataggtgaggtacttgctatacaaccaggaggagcagactacgaagttacagttaat
tttccaagtgctggtgtaaaaaaactcatggctagactagcaaatcttaaaaaagcttaa
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