Vallitalea guaymasensis: HYG85_08490
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Entry
HYG85_08490 CDS
T07172
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
vgu
Vallitalea guaymasensis
Pathway
vgu03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
vgu00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
HYG85_08490
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
vgu03021
]
HYG85_08490
03400 DNA repair and recombination proteins [BR:
vgu03400
]
HYG85_08490
Enzymes [BR:
vgu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
HYG85_08490
Transcription machinery [BR:
vgu03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
HYG85_08490
DNA repair and recombination proteins [BR:
vgu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
HYG85_08490
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_2
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpb2_45
RNA_pol_Rpb2_1
THP2
Motif
Other DBs
NCBI-ProteinID:
QUH28956
UniProt:
A0A8J8M9S8
LinkDB
All DBs
Position
complement(1905364..1909215)
Genome browser
AA seq
1283 aa
AA seq
DB search
MEKNRIRPMKIGRGLRMSYSRKKEVLDMPNLIEVQKNSYQWFLKEGLKEVFRDISPITDY
SGNLVLELIDFSLNKELKYTIEECKERDATYAAPLKVKVRLINKEKDEINEHEIFMGDLP
VMTETGTFIINGAERVIVSQLVRSPGIYYGINFDKIGKRLFSSTVIPNRGAWLEYETDSN
DIFYVRVDRTRKVPITVLIRTLGIGTDAAIVDLFGEEPKILASIEKDGTTSYEEGLIEIY
KRIRPGEPPTVESAESLINTMFFDPRRYDLAKVGRYKFNKKLALKNRVKGFPLSESVVDG
STGEVIAEAGTVITEEIADNIQDAAIPYIWVTVEDRKVKVLSNLAVDITKFVDIDPKEFD
IYERVYYKALQEILEEYDDIEEIKEAIKRNIHKLIPKHITKEDILASINYNIALEYGIGN
KDDIDHLGNRRIRAVGELLQNQFRIGLSRLERVVRERMTIQDSDGISPQTLINIRPVTAA
IKEFFGSSQLSQFMDQNNPLAELTHKRRLSALGPGGLSRERAGFEVRDVHHSHYGRMCPI
ETPEGPNIGLINSLACYARINEYGFIEAPYRKIDKSSGVPVVTDEVIYVTADEEENYRVA
QANEILDEEGHFLHKYVTGRHKEDILEMDANTIDLMDVSPKQLFSVATSMIPFLENDDAN
RALMGSNMQRQAVPLLMTDSSIVGTGMEHKAAIDSGVVIIAKRPGVVERVASKKVVIKTD
DGQRDIYKLQKFSRSNQGTCINQRPIVNKGQRVEMGEVIADGPSTDHGEIALGKNPLIGF
MTWEGYNFEDAILLSENLVKEDVYTSVHIEEYEAEARDTKLGPEEITRDVPGVGEDALKD
LDERGIIRIGAEVRANDILVGKVTPKGETELTAEERLLRAIFGEKAREVRDTSLRVPHGE
TGIIVDVKVFTRENGDELPPGVNQSVRAYIAQKRKISVGDKMAGRHGNKGVISRILPVED
MPFLPNGRPLDIVLNPLGVPSRMNIGQVLEVHLGLAAKALGFKIATPVFDGANEDDIMDT
LELANDYVNEEFDTFASKYGELLRPDVLKYLDENKAHREEWSGVPISRDGKIYLKDGRTG
EYFDNPVTVGYMHYLKLHHLVDDKIHARSTGPYSLVTQQPLGGKAQFGGQRFGEMEVWAL
EAYGAAYTLQEILTVKSDDVVGRVKTYEAIIKGENIPEPGIPESFKVLLKELQSLALDVK
ILRSDATEVEIKENMDDVDDLSINLEGKEDEYVASDVVSGGASKKETSETDELFDDIEDE
SYDEFDEDNFIISDEKTLFDDEK
NT seq
3852 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaaaacagaattcgacctatgaagatcgggagaggccttagaatgagttactcc
cgaaaaaaagaagtcctagacatgccaaatttaatagaagtacaaaaaaactcttatcaa
tggtttttaaaagaaggacttaaggaagtatttcgtgatatatcccctattactgattat
agtgggaacttggtactagaacttatagacttctcacttaataaagaattaaagtacaca
attgaagaatgcaaagaaagagatgccacttacgcagctccgttaaaagtaaaagtcaga
ttgattaataaggaaaaagatgaaattaatgaacatgaaattttcatgggtgacttacct
gtaatgacagaaacaggtacatttataattaatggtgctgagagagttattgtaagtcaa
ttagttcgttcgcctggaatatactatggaattaattttgataagattggtaaaagatta
ttctcatcaacagtaattcctaatagaggtgcatggttagaatacgaaactgattctaac
gatattttttacgtgcgcgttgacagaacaagaaaagtaccaataacagtattaataaga
acattaggtatcggaacagatgcagctattgtggatttattcggggaagagcctaaaata
ttagcaagtattgaaaaagatggaacaacgtcttacgaagaaggattaattgagatttat
aagcgtataagaccgggagaaccaccaacagtagaaagcgctgagtcattaattaataca
atgttttttgatcctagaagatatgatttggctaaagtaggacgatataaatttaataag
aaattagcactaaaaaatagagttaaaggtttccctttatcagaatcagttgttgatgga
tcaactggtgaagttattgcagaggctggaactgtaattactgaagaaatagcagataac
attcaagatgctgctataccatatatttgggttactgttgaagacagaaaagtaaaagta
ctctctaacctagcggtagacataactaaatttgtagatatagacccaaaagaatttgat
atatatgaaagagtatattacaaagcattgcaagaaatattagaagaatacgatgacata
gaagaaataaaagaagctattaagagaaacatacacaaattaatacctaagcatataact
aaagaagatatattagcttcaattaactataacattgctttagaatatggtataggaaat
aaagacgacattgaccatttaggaaatagaagaattcgtgccgtaggtgaattattacaa
aaccaatttagaataggtttatctagactagaacgtgttgttagagaaagaatgacaata
caagatagcgatggaatatcaccacagacattaataaatataagacctgttacagcagct
attaaagaattctttggtagttcacagttgtcacagtttatggaccagaataatcctcta
gctgagttgactcataaaagacgtttatcagctcttggaccaggtggtctttcaagagag
cgtgcaggttttgaggttcgtgacgtccatcactcccactatggtagaatgtgtcctata
gaaacaccagagggacctaacattggactaatcaactccttagcttgttatgcaaggatt
aatgaatatggatttattgaagcaccttatagaaaaatagacaaatcttctggagttcca
gtagttacagatgaagtaatctatgtaacagctgacgaagaagaaaactatagagtagca
caggcgaatgaaatacttgatgaagaaggacacttcttacacaaatacgttacaggtaga
cataaagaagatatattggagatggatgcgaacactattgatttaatggacgtatcacca
aaacagttattctcagttgcaacatcaatgattccattcttggaaaatgatgatgccaac
cgtgcgctaatgggatcaaacatgcaacgacaagctgtaccattgctaatgactgactct
tcaattgtaggtacaggtatggagcataaagcagcaattgactctggtgtagtaattatt
gctaaacgaccaggtgttgtagaaagagttgcttccaaaaaagtagtcatcaaaacagat
gacggacaacgagatatatacaaattacaaaaattttcacgtagtaaccaaggaacatgt
attaaccaaagaccaatagtgaataaaggtcaaagagtagaaatgggggaagtcattgct
gatggaccatcaactgatcatggtgaaatagcattaggtaaaaaccctctaatcggtttt
atgacttgggaaggttataactttgaggatgctatcctattaagtgaaaatctagtaaaa
gaagatgtttatacatctgttcatatagaagaatacgaagcagaagcaagagacactaag
cttggaccagaagaaattactagagatgtaccaggtgttggtgaagatgctctgaaagac
cttgatgaaagaggtatcataagaattggagcagaagtacgtgctaatgatatattagta
ggtaaagtaacaccaaaaggtgaaacagaattaacagcagaagaaagacttctaagagca
atatttggtgaaaaagccagagaagttagagacacatccctaagagtaccacacggagaa
actggtattatagttgatgtaaaagtatttactagagaaaacggagatgaattaccacca
ggagtaaatcaatccgttagagcatatatagcacaaaaaagaaaaatctcagttggagat
aagatggctggacgtcatggtaacaaaggtgtaatctccagaatcttaccagttgaagat
atgccatttttaccaaatggtagaccacttgatatcgtgcttaacccactaggggtacca
tcccgtatgaacataggacaggtacttgaagtccatttaggattagctgcaaaagcactt
ggattcaagattgctacacctgtatttgatggcgcgaacgaagatgatatcatggataca
ttagagcttgctaatgattacgttaatgaagaatttgatacatttgcttctaaatacgga
gaattattacgacctgatgttctaaaatatttagatgaaaacaaagctcaccgtgaagag
tggtcaggtgttccaatttcaagagacggtaagatttacttgaaagatggtagaacagga
gaatattttgataatcctgttactgtaggatatatgcattacctaaaacttcaccattta
gttgacgataagattcatgctagatcaactggaccttattcactagtaactcaacagcct
ttaggtggtaaagcacaattcggtggacagagatttggtgagatggaggtatgggcacta
gaagcatatggtgctgcttatacacttcaagagatattgacagtaaaatctgatgatgtt
gtaggacgtgtaaaaacttacgaagctattataaaaggtgaaaatataccagaaccagga
ataccagaatcattcaaggtattattaaaagaattacaatccttagcccttgatgttaaa
attcttagaagtgatgctacagaagtagaaatcaaggaaaatatggatgatgtagatgac
ttatctattaacctagaaggaaaagaagacgaatatgtggcttcagacgtagtaagtggt
ggagctagtaaaaaagagacttcagaaacggatgaactgtttgatgatatagaagatgag
agttatgatgaatttgatgaagataattttataatatcagatgaaaaaacattatttgac
gatgagaagtaa
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