Vallitalea guaymasensis: HYG85_12160
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Entry
HYG85_12160 CDS
T07172
Name
(GenBank) AAA family ATPase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
vgu
Vallitalea guaymasensis
Pathway
vgu03420
Nucleotide excision repair
vgu03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
vgu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
HYG85_12160
03430 Mismatch repair
HYG85_12160
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vgu03400
]
HYG85_12160
Enzymes [BR:
vgu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
HYG85_12160
DNA repair and recombination proteins [BR:
vgu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
HYG85_12160
MMR (mismatch excision repair)
Other MMR factors
HYG85_12160
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Viral_helicase1
DEAD
ResIII
AAA_30
RuvB_C
SLFN-g3_helicase
NACHT
DUF6120
Motif
Other DBs
NCBI-ProteinID:
QUH29618
UniProt:
A0A8J8SCA2
LinkDB
All DBs
Position
2770818..2773028
Genome browser
AA seq
736 aa
AA seq
DB search
MEAKMHKDYMEETERLEYIKQMIEEEIVLLSNKTYTVLNEDVIAEIVYMDNQRMKKLETS
AHNPYFGRIDFRERNQDKLENIYIGKASLMDTDSDEDGVMLITDWRAPISTLYYDGNIGS
VKYNCPAGNIGGELSLKRNYKIENGHLEKITDIDVSALDEMLLEALEDKKDTKLKDIVST
IQSEQNEIIRADLTKSLIIQGVAGSGKTTIALHRIAYLIYTYQHRYRPHEFMIIAPNKLF
LQYIEDMLPELGVEDVEQTTMEDLTKNIVAEHFSISEDDDKLKKIIENESDKNLVESLRA
ISRIKTDLKYKVILEEFVDEIINEILPKDDLIFEGVLIIEASELSRIFHENYKRYSVLKS
IKLVKKLMTTRFENSKSDIEDNIYATINQRQINLEKDEKNISNQNEEIKKIHLEQQSRIK
NMKKNFIKLMNTYLKEPKQSILKYYEKFLIKDKFINKLISDKEYLMDYFKEMSKNIRTNK
MVEIEDLPALMYLQHKLIGAKNISNTKHIVIDEGQDFGTFQYYILRDIMKEATFTILGDI
AQGINYHRGTSDWEDVKQKVFKDQCQIKYLQQSYRTTVEIMNAANEVIGKVEDENIILAH
PVLRHGAQVEKIKKDSYGDIVDCIATEINKLMDKYNSIAIIGKNNQQCEKIYDQMTSKGI
DVQWLKDRESEYSQQIVLLPSYLAKGLEFDCVIIPGGGEDNYKMNKLDGMLLYVCMTRAL
HELRIYYVNECSELLK
NT seq
2211 nt
NT seq
+upstream
nt +downstream
nt
atggaagctaaaatgcataaggattatatggaagaaacggaaagattagaatatatcaaa
caaatgattgaagaggaaatagtattgttaagtaataaaacctatactgtattaaatgag
gatgttattgcagagatagtatatatggataaccagaggatgaaaaagcttgaaacgtca
gctcataatccctattttggaagaattgattttagagaaaggaatcaagataagctagaa
aatatttatataggtaaagcatccttaatggatactgatagtgatgaagatggagtcatg
cttattacggattggagagcgccaatctctaccctgtattatgatggtaatattggaagt
gttaaatataattgtccagcaggtaatattggtggggagttatcattaaaaagaaactac
aagattgaaaatggacatttggaaaaaataacagatattgatgtatcagcattagatgaa
atgcttttagaagcattagaagataaaaaggatacaaaattaaaagatatcgtttcgacg
attcaatcagaacagaatgaaatcattcgagcagatttgacgaaatcgctaattatacaa
ggtgttgctggaagtgggaagactactattgcattacatcgaattgcatatttaatctat
acgtaccagcatagatatagaccccatgaattcatgatcattgcacccaataaactgttt
ttacaatatatagaggatatgttaccagaattaggtgttgaagatgtagaacaaacgact
atggaggacctaacaaaaaatattgtagcagaacacttttctataagtgaagatgatgat
aaattaaagaaaattattgaaaatgaaagtgataaaaatttggtggaatccttaagagct
atatctcgtataaaaactgacttgaaatataaagttatacttgaagaattcgttgatgaa
ataattaacgaaatacttcctaaagatgatttgatatttgaaggagttctaataatagaa
gcaagtgaattatctagaatatttcatgagaattataaaagatattctgtgttgaaaagt
ataaaattagttaagaaattaatgactacaagatttgaaaatagtaaaagtgatatagaa
gacaatatatatgcaactataaaccagagacagatcaatcttgaaaaagatgaaaaaaac
ataagcaaccaaaatgaagagattaaaaaaattcatctggagcaacagagtcgcataaaa
aacatgaaaaagaatttcataaaactcatgaatacttacctgaaagagcctaaacaatca
atactcaaatattatgagaagtttttgataaaagataaatttattaataagcttattagc
gataaagaatatttaatggattactttaaagaaatgtccaaaaatattcgaacaaataaa
atggttgaaatagaagacctgccagccctcatgtatttacaacataaattaataggagct
aagaatatatcaaatactaagcacattgtaatagatgaaggacaggattttggaactttc
caatattatatattaagggatataatgaaagaagctacgttcactatacttggagatatt
gcccaaggtattaactatcatagaggtactagtgattgggaagatgtcaaacaaaaagta
ttcaaggatcaatgtcaaataaagtatctgcagcagagttatcgtactacagtagagatt
atgaatgcagctaatgaagtaattggaaaggtagaagatgagaatattatattagcacat
ccagtactaaggcatggggcacaagttgaaaaaattaaaaaagatagttatggagatata
gtagattgtattgccacagaaataaataaacttatggataagtataattctatagcaatt
ataggtaaaaataatcagcagtgtgaaaaaatatatgatcaaatgacgagtaaaggaatt
gatgttcaatggttgaaggacagagaatcagagtacagtcagcaaattgtattgttacct
tcctatcttgcaaaaggattagaatttgattgtgttattattcctggtggaggagaagat
aattataaaatgaataaactggatggaatgttgttatatgtatgtatgacaagggcatta
catgagctaagaatatattatgtgaatgaatgtagtgagttgttaaaatag
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