Vallitalea guaymasensis: HYG85_12435
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Entry
HYG85_12435 CDS
T07172
Name
(GenBank) 3'-5' exonuclease
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
vgu
Vallitalea guaymasensis
Pathway
vgu03030
DNA replication
vgu03430
Mismatch repair
vgu03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
vgu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HYG85_12435
03430 Mismatch repair
HYG85_12435
03440 Homologous recombination
HYG85_12435
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
vgu03032
]
HYG85_12435
03400 DNA repair and recombination proteins [BR:
vgu03400
]
HYG85_12435
Enzymes [BR:
vgu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
HYG85_12435
DNA replication proteins [BR:
vgu03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
HYG85_12435
DNA repair and recombination proteins [BR:
vgu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
HYG85_12435
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
DEDDh_C
RNase_H_2
DUF3072
Motif
Other DBs
NCBI-ProteinID:
QUH29664
UniProt:
A0A8J8SCH1
LinkDB
All DBs
Position
2822400..2823107
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AA seq
235 aa
AA seq
DB search
MKNFVAFDIETTGISPMDSRITEIGAVKIVDGNVVDEFNQLINPEISIPDNIVSLTGITD
ELVKDEPTINFVLPDFIDFCKGFDILGHNIKFDFSFIKTYALKLNMTFEKNALDTLTISR
MVLKDLPSRRLGCLCDYYRIDYLNGHRAFNDAYATYQLYNQLKTDFYEGNKELFIPKPIL
WKPKKTSAITYKQKAYLAALIRKHNVVLDKQIDELSKSEASRAIDNIINTYGRAK
NT seq
708 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaactttgtagcatttgatatagagactacaggtataagcccgatggatagtaga
attactgaaattggagcagttaaaatagttgatggtaatgtagtagatgaattcaatcag
ctaataaacccagaaatatcaattcctgacaatatcgtatcacttactggtattactgac
gaactagtaaaggatgaacctacaatcaattttgtcttaccggattttattgatttttgt
aaaggatttgatatacttggtcataatataaaattcgatttcagctttataaaaacatat
gcactaaaattaaatatgacttttgaaaaaaatgcccttgatacattgaccatatcaaga
atggtattaaaggatttgcctagcaggagattgggctgtttatgtgattactatagaata
gattatctaaatggtcatcgtgcattcaatgatgcatatgctacatatcagttatataat
cagcttaaaacggatttttatgaagggaataaggaattatttattccaaaaccaatcttg
tggaaacctaagaaaacttctgcaattacatataaacaaaaagcttatctggctgcacta
ataagaaaacataatgtagtccttgataagcagattgacgaattatctaaaagtgaagcc
agtagagctatagataatattattaatacatatggtagagcaaaataa
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