Vallitalea guaymasensis: HYG85_12770
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Entry
HYG85_12770 CDS
T07172
Name
(GenBank) HD domain-containing protein
KO
K03698
3'-5' exoribonuclease [EC:3.1.-.-]
Organism
vgu
Vallitalea guaymasensis
Brite
KEGG Orthology (KO) [BR:
vgu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vgu03019
]
HYG85_12770
Messenger RNA biogenesis [BR:
vgu03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
HYG85_12770
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Paralog
GFIT
Motif
Pfam:
HD
tRNA_anti-codon
TraI_2
HDOD
YfbR-like
Motif
Other DBs
NCBI-ProteinID:
QUH29729
UniProt:
A0A8J8MB50
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All DBs
Position
2917273..2918214
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AA seq
313 aa
AA seq
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MRYIVDMKEGEQIQDHYLCVNKQVLKTRAGKTYYSLKLQDKTGVVDAKIWDLNDGINDFS
EHEYIKIDALVITFQNSIQLNIRRLRKSSEGEYDPREYIPVSSRDINEMYSELLTFVNDI
DNKYLSALVKKFFVEDREFIKTFKEHTAAKTMHHSYLGGLLEHTLCVLNMCKFFAGNYKV
INKDILYTSALFHDIGKIKELSKFPIIEYTDPGQLLGHIMISTEWVSDRIKEIPGFPEDL
AYMVKHCILAHHGELEYGSPKKPQTIEALALHFADNCDAKLRTFSDLLETSDVEDNWLGW
QRIFDSNVRRTRY
NT seq
942 nt
NT seq
+upstream
nt +downstream
nt
atgcgttacatagtagacatgaaagaaggagaacaaatacaagaccattacttgtgtgtt
aataagcaagtattgaaaacaagagctggtaaaacctactattccctaaaattacaagat
aagacaggtgtagtagatgctaagatatgggatttgaatgatggcatcaatgattttagt
gagcatgaatacattaaaatcgatgctttggttataacattccaaaactccatacagctt
aatataagaagattgagaaaaagcagtgaaggagagtatgacccaagagagtacattcca
gtttctagcagggatattaacgagatgtattcagaattacttacatttgttaacgatata
gataacaaataccttagtgctttagttaagaaattctttgttgaagatagagagttcatt
aaaacattcaaagagcatacagctgcaaaaacaatgcatcatagttatctaggaggttta
ctagagcatactctttgtgtactcaatatgtgtaaattctttgctggtaattataaagtg
atcaataaggatatattatatacttctgcattgttccacgatataggaaagattaaagag
ttgtcaaaattccctattatcgaatatactgaccctggtcaattgttaggtcacataatg
atatcaactgaatgggtttctgatagaattaaagaaattccaggtttcccagaggatctt
gcttacatggtaaaacattgtatcttagctcatcacggagaattggaatatggttcacct
aagaaaccacaaacaatagaggcacttgctctacattttgcagataactgtgatgcaaaa
ttaagaacattttctgatctattagaaacaagtgatgtggaagacaattggttaggatgg
cagagaatcttcgattctaatgttagaagaacaagatattaa
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