Vallitalea guaymasensis: HYG85_12775
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Entry
HYG85_12775 CDS
T07172
Symbol
rlmD
Name
(GenBank) 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
vgu
Vallitalea guaymasensis
Brite
KEGG Orthology (KO) [BR:
vgu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
vgu03009
]
HYG85_12775 (rlmD)
Enzymes [BR:
vgu01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
HYG85_12775 (rlmD)
Ribosome biogenesis [BR:
vgu03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
HYG85_12775 (rlmD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
TRAM
Methyltransf_31
TRM5-TYW2_MTfase
Methyltransf_25
Methyltransf_15
Cons_hypoth95
MTS
PrmA
Methyltransf_11
Motif
Other DBs
NCBI-ProteinID:
QUH29730
UniProt:
A0A8J8MBM4
LinkDB
All DBs
Position
2918335..2919714
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AA seq
459 aa
AA seq
DB search
MKAKNVELPVVKNEYYEMVIDDLGINGEGIGKIDGYTLFVDGALPQEKIKVKVIKTKKNF
GFGKLIDILEPSIHRIDPVCDIAKRCGGCQLQHLSYEGQLNYKQKKVQDIIERIGGITDI
EVNKVIGMENPYFYRNKVQFPVGSMGDDSVNIGFYAMRSHNIITTDKCYIQQPVNKDIIG
VVKEYMLKNNVKPYNEVSHKGVVRHIVTRVSFHTKEIMVGVVINGNKLPNSDELISNLRK
IEDVAGIFISVNKEKTNVIMGNKIKMLWGKPYITDYIGEVAYNISPLSFYQVNPVQTEKL
YSKVLEFADLSGDEIVWDAYCGIGTISLFLAGKSKKVMGVEIVPEAIVDAKKNAELNDIG
NTEFYVGKAEEVITGKYNEGVRADVIVVDPPRKGCDRELLETIMKMQPEKVVYVSCDPGT
MARDVKVLGEGGYRVEEIQPVDMFPQTVHVETVSLLIKK
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atgaaggcaaaaaatgttgagttaccggtagttaagaatgagtattatgaaatggttata
gatgacctaggtataaatggtgaaggtataggtaagatagatggctataccctatttgtt
gatggtgctttaccacaagagaaaatcaaggtaaaagtaattaagactaaaaagaatttt
gggtttggaaaattaattgatatcttagaaccttctattcatagaattgaccctgtgtgc
gatatagcaaaacgatgcggtgggtgtcagttacagcatttatcctatgaaggtcaatta
aattataaacagaaaaaggtacaagatattattgagagaatcggcggtataactgatata
gaagtcaacaaagttataggtatggaaaatccttatttctatagaaataaagtccaattc
cctgtaggaagcatgggagatgattctgtaaatattggattctatgcaatgagaagccat
aatataataactacagataaatgttatattcaacagccagtaaataaggatattattggt
gttgttaaagaatatatgttgaagaataatgtaaagccatataatgaggtaagtcataag
ggtgttgttagacatattgttactagagttagttttcatacgaaagagattatggtcggt
gttgtaattaatggtaataagttgcctaatagtgatgaactgattagtaatcttaggaaa
atagaggatgtagctggtatatttattagtgttaataaagaaaagactaatgttatcatg
ggtaataagataaagatgttatggggtaaaccttatataactgattatattggagaagtt
gcctataatatttcgccattatctttttatcaagtgaatcctgtacagactgagaagttg
tatagtaaggttttagagtttgcagatttgtcaggggatgaaatagtatgggatgcttat
tgtgggattggtaccatatcgttatttttagcaggtaagagtaagaaggttatgggagta
gagatagttccagaagctatagtggatgctaagaagaatgctgagcttaatgatattggt
aatacggaattttatgttggtaaggctgaagaggtaattacaggaaagtataatgaaggt
gtcagggcagatgttatagttgttgatccacctagaaaagggtgcgatagggagctgttg
gagactattatgaaaatgcagccagagaaggttgtgtatgtgtcatgtgaccctggtact
atggctagagatgttaaggtgcttggggaaggcggttatagggttgaggaaattcagccg
gtggatatgtttcctcagactgtgcatgtggagacggtctcgctgttaataaagaaatag
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