Vallitalea guaymasensis: HYG85_21900
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Entry
HYG85_21900 CDS
T07172
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
vgu
Vallitalea guaymasensis
Brite
KEGG Orthology (KO) [BR:
vgu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
vgu03032
]
HYG85_21900 (topA)
03400 DNA repair and recombination proteins [BR:
vgu03400
]
HYG85_21900 (topA)
Enzymes [BR:
vgu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
HYG85_21900 (topA)
DNA replication proteins [BR:
vgu03032
]
Prokaryotic type
DNA Topoisomerases
HYG85_21900 (topA)
DNA repair and recombination proteins [BR:
vgu03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
HYG85_21900 (topA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim
Zn_ribbon_Top1
Toprim_4
Zn_ribbon_recom
Anti-TRAP
Motif
Other DBs
NCBI-ProteinID:
QUH31431
UniProt:
A0A8J8MEH4
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All DBs
Position
5100886..5102961
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AA seq
691 aa
AA seq
DB search
MAKNLVIVESPAKAKTIKKFLGSNYKVEASMGHVRDLPKSQLGVDVENDFEPKYITIRGK
GELLKHLRKEVKKANKVFLATDPDREGEAISWHLLFSLNLADKKFYRITFNEITKNAVKN
SIKQAREINMDLVDAQQARRILDRIVGYKISPLLWKKIKKGLSAGRVQSTALKLICDREE
EINSFIPEEYWSLDAKLQDKDSKDKFTATFYGKSKKMKISSKEQVDEIIEYLKDKEYIVS
DVKESERLKKPLLPFITSTLQQEAAKKLNFTTSKSMRIAQQLYEGIDVKGKGTVGLITYL
RTDSTRISDDADKAVKEYISSSFGEEYVNNNKISSNKKSNVQDAHEAIRPTYVDIYPDDI
KESLSRDQLRLYKLIYNRFVASRMKPAKYATKSIKINGGDYRFNASGSVLIFDGFLKVYN
ISDDKEDNQKIGNINKDSNLNLIDLSKKQHFTQPAPRYTEASLVKTLEENGVGRPSTYAP
TISTIQKRGYVSKEKKNIFPTELGEIVNEIMEKYFEDIVNVKFTAALEKELDEVETGNIQ
WKEVLRKFYPNFYETIEYAEEKIGKIEIKDEVSDVLCDKCGRNMVIKIGRYGKFLACPGF
PECRNAKPLYEKVEGVSCPKCSGEVFIKKTKKGRRYYGCENNPECDFMTWNRPTKEICPK
CGTIMVEKGKYLKCNNEECNYSVLKEKEEQE
NT seq
2076 nt
NT seq
+upstream
nt +downstream
nt
atggcaaagaatttagtaatagttgaatcgcctgcaaaagcaaagactataaaaaaattt
ttaggtagcaattataaagttgaagcttcaatgggacatgtaagagatttacccaaaagt
cagttaggggtagacgtagaaaatgattttgaaccgaaatatattactataagaggtaaa
ggagaactcctaaaacatcttagaaaagaagtaaaaaaggctaacaaagtttttctcgct
actgaccctgaccgcgaaggtgaagcaatatcatggcatttgttattttctctgaattta
gcagacaaaaaattctacagaataacttttaatgaaataacaaaaaatgcagttaagaat
tcgataaaacaagctagagaaattaacatggatttggttgatgctcaacaggctagaagg
atactcgacagaatagtcggatataagattagcccgctactatggaaaaaaataaaaaaa
ggactcagtgcaggaagggtccaatcaacagctctaaaactcatttgtgatagggaagaa
gaaattaacagcttcataccggaagaatattggtcattagatgccaagttgcaagataag
gattcaaaagacaaattcactgctacattctatggtaagagcaaaaagatgaaaatatct
tcaaaagagcaggttgatgaaataattgaatacctaaaggataaagaatatattgtaagt
gatgttaaagaaagtgaaagactaaaaaaaccacttctaccgtttattacgagtactctt
caacaagaagctgctaagaaacttaattttacaacttctaaatcaatgagaatagctcaa
cagttatatgaaggtatagatgtaaagggaaaaggtactgtaggacttattacttatcta
cgtactgactcaactcgtatatctgatgatgcagataaagctgtaaaagaatacatttca
agtagttttggagaagagtatgtaaataataataaaatctcgagcaataaaaagagtaat
gttcaagatgcccatgaagctataagaccgacttatgttgatatttatcccgatgatata
aaagaatcactatcaagggatcaattgagattatataagttgatttacaacagatttgtt
gcaagtagaatgaaacccgctaaatacgctacaaaatcaattaaaattaatggaggagat
tacagatttaacgcttccggttctgttttgatcttcgatggatttttaaaagtatataat
atctcagatgataaggaagacaaccaaaaaattgggaatattaataaagattctaattta
aatttaatagatttgagcaaaaaacaacattttactcaaccggcacctagatatacagaa
gcatcattggtaaagacattagaagagaatggtgttggtagaccaagtacctatgcaccg
actatatctaccattcaaaaaagaggctatgtttcaaaagaaaagaagaatatctttcct
acagagctaggagaaatagttaacgagataatggaaaaatattttgaagatatagtaaat
gttaaattcacagcagcgcttgaaaaagaactagatgaagttgagactggaaatatacaa
tggaaagaagtacttagaaaattttatcctaatttttacgaaacaattgaatacgctgaa
gaaaaaataggcaaaattgaaataaaggatgaagtttctgatgttctatgtgataaatgt
ggtagaaacatggtaatcaaaataggtagatacggtaagtttttagcatgtcctggtttt
ccagaatgcagaaacgcaaaacctttatatgaaaaggttgaaggtgtatcttgccctaaa
tgtagtggcgaagtctttattaaaaagactaaaaagggcagaagatattatgggtgtgaa
aataacccagaatgtgattttatgacttggaatagacctactaaggaaatatgtccaaag
tgtggaactattatggttgaaaagggcaaatatctaaaatgtaacaacgaagaatgtaat
tatagcgttctcaaggaaaaagaagaacaggaataa
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