Vallitalea guaymasensis: HYG85_23135
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Entry
HYG85_23135 CDS
T07172
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
vgu
Vallitalea guaymasensis
Pathway
vgu03030
DNA replication
vgu03410
Base excision repair
vgu03420
Nucleotide excision repair
vgu03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
vgu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HYG85_23135 (polA)
03410 Base excision repair
HYG85_23135 (polA)
03420 Nucleotide excision repair
HYG85_23135 (polA)
03440 Homologous recombination
HYG85_23135 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
vgu03032
]
HYG85_23135 (polA)
03400 DNA repair and recombination proteins [BR:
vgu03400
]
HYG85_23135 (polA)
Enzymes [BR:
vgu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
HYG85_23135 (polA)
DNA replication proteins [BR:
vgu03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
HYG85_23135 (polA)
DNA repair and recombination proteins [BR:
vgu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
HYG85_23135 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
HYG85_23135 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_polI_exo1
DNA_pol_A_exo1
HHH_5
HHH
DUF1493
Motif
Other DBs
NCBI-ProteinID:
QUH31663
UniProt:
A0A8J8MF46
LinkDB
All DBs
Position
complement(5365895..5368564)
Genome browser
AA seq
889 aa
AA seq
DB search
MSKDKVLLVDGNSIMNRAYYGLPLLSNSEGIYTNAVLGFVNILLKVIKDESATHIGIAFD
LKAPTFRHEKYKEYKGNRKGMPDELGMQMPIIKDVLRAMNINIYEVEGYEADDVLGTLAN
KSEKSGCETTVLSGDRDLLQLATKKVKISIPKTKKGTTTTENYFDEDVIALYGVTPTEFI
DLKGLMGDSSDNIPGVPGIGEKTAIKIITNYHSIEEAYNHIDELKPPRASKNLKENYELA
ILSKELATICVDCEIDFEKDSLKIDNIFNEETYTIFKKLEFKRLLEKFDSSIGSNDENNS
LSVIHHSISTKDELDKLVPKISNEKTLAYYIVTENHKIIGISIAYNEQESYFIKCSDELD
SSYVLETIKSIFENKNIKKITHGLKDDLHIFSEYNIKCENICFDTFVGAYTINPTKDTYD
IDDIAKEYLGIIIKSEEELLGKGRNKISYLDLPEEEFTNYCSLLAAIIYHSYEKIDDMID
ELNMHQLFYDIEMPLIYVLFDMEFYGIKVDSVLLHEYSDKLGKIIDLLESEIYELAGEEF
NIKSPKQLGVILFEKLELPIIKKTKTGYSTAAEVLDKLRGEHPIIDKISEYRQLTKLKST
YADGLFDYIGKEDSRIHSTFKQTITSTGRISSIEPNLQNIPIRMDIGREIRKVFVPREDY
VFIDADYSQIELRLLAHLSEDETLIEAYNNHQDIHRLTASQVFHIPFEEVTNLQRSNAKA
VNFGIVYGIGAFSLSQDLHITRKEAQEYIDKYFKKYPSVKIYLDNCIRFAKNRGYSLTML
NRRRPIPELNSSNFMQRAFGERIAMNTPIQGSAADVIKIAMINISNKLKSEKLRSRLILQ
IHDELLIEAHRDEVELVKKYLVEEMENAVDISVKLEVDMNMGMTWYDTK
NT seq
2670 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaagataaagtactattagttgatggaaatagtattatgaatagagcttattat
ggattacctttgttatctaattcagaaggtatttatactaatgctgtcttaggttttgta
aatatactattaaaagtaatcaaagatgaaagtgcaacacatatcggcattgcatttgat
cttaaagcacctacattccgacatgaaaaatataaagaatataagggcaatagaaaaggt
atgccagatgagttaggaatgcaaatgcctataatcaaagatgtattaagagccatgaat
attaatatttatgaggttgaaggctatgaagctgatgatgtacttggaacattagcaaat
aagagcgagaaatcaggttgtgaaacaactgtattatctggagatagggatttattgcag
ttggcaactaaaaaagttaaaattagtattccaaagactaaaaaagggactactacaact
gaaaactattttgatgaagatgttattgctctttatggagttactcctacagaatttatt
gatttgaaagggctaatgggtgattcatcggacaatattccaggggttcctggaatcggt
gaaaaaacagcaattaagattatcactaattatcattcaatagaagaagcttataatcat
attgatgaattaaagccacctagagcatcaaaaaatctaaaagaaaattatgaacttgca
attttaagtaaggaattagctactatctgtgtagattgtgaaatagactttgaaaaagat
agtttgaagatagataacatatttaatgaagagacatataccatattcaaaaagttggaa
ttcaaacgtttattggaaaaatttgattcttctataggtagtaatgatgaaaataactca
ctatcggtaatccatcattccatatctacaaaagatgaattagacaagcttgttcctaag
atctccaatgaaaaaacattagcatattatattgtgactgagaatcataaaattatcggt
attagtattgcttataatgaacaggaatcatattttattaaatgcagtgatgaacttgat
agttcatatgtccttgaaaccataaaaagtatttttgaaaataaaaatattaagaagatt
actcatggattgaaggatgatcttcacatatttagtgagtataatataaaatgtgaaaat
atatgttttgatacatttgttggagcttatactatcaatccaacaaaagatacttacgat
atagatgatattgctaaagaatacctggggattattattaaatcagaagaagagctatta
gggaaaggtagaaataagatttcatatttagacctacctgaggaagagttcactaattat
tgttctttattagcagcgattatctatcatagttatgaaaagatagatgacatgattgat
gagcttaacatgcatcaattgttttatgatattgaaatgccattaatctatgtcttattt
gatatggagttttatggtatcaaagttgactctgtattgttacatgaatactcggacaag
ttgggcaaaattatagatttgcttgaaagtgagatctatgaattagctggagaagaattt
aatattaaatcccccaaacaacttggtgttatcttatttgaaaaattggaactgcctatt
atcaagaaaaccaagacaggttattctactgctgcagaggtattggataaattgagaggt
gagcatccaataattgataagattagtgagtatagacaacttactaagttaaaatctacc
tatgcagatggattatttgattatataggcaaagaggattcaagaattcattctaccttt
aaacaaactattacatcaacaggtagaatcagctctatagaacctaatcttcaaaacata
ccaatacgaatggatattggcagagagataagaaaggtatttgtaccaagagaggattat
gtttttattgatgcggattattctcagatagaattacgtttgttagcacatctatcagaa
gatgaaacgttgattgaagcttataacaatcatcaagatattcatagattgacagcatca
caagtttttcatattccttttgaagaagtaaccaatttgcaaagaagtaatgcaaaagct
gttaactttggaattgtatatgggataggagcatttagtttaagtcaagatctccatatt
acaagaaaagaagcacaagaatatatagataaatattttaaaaagtacccaagtgtaaag
atataccttgataattgtataaggtttgctaagaatagagggtattccctaacaatgctt
aataggagaagaccaattccagaacttaattccagtaatttcatgcaacgtgcctttggt
gagagaatcgctatgaatacacctatacaaggtagtgccgctgatgttattaaaattgct
atgattaatattagcaataagctaaaatcagaaaaacttcgttcaagattaattcttcaa
atacacgatgaattattaatagaagcacacagggatgaggttgaattagtaaaaaaatat
ttagtagaagaaatggaaaatgcagttgatataagtgtaaaattagaagttgatatgaat
atgggaatgacttggtatgatacgaaataa
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