Vallitalea guaymasensis: HYG85_23990
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Entry
HYG85_23990 CDS
T07172
Symbol
rny
Name
(GenBank) ribonuclease Y
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
vgu
Vallitalea guaymasensis
Pathway
vgu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
vgu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HYG85_23990 (rny)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vgu03019
]
HYG85_23990 (rny)
Messenger RNA biogenesis [BR:
vgu03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
HYG85_23990 (rny)
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Gene cluster
GFIT
Motif
Pfam:
RNase_Y_N
HD
KH_1
HDOD
KH_KhpA-B
YgxA-like_sub_bind
GLE1
AllH
Motif
Other DBs
NCBI-ProteinID:
QUH31828
UniProt:
A0A8J8MFG0
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Position
complement(5580570..5582156)
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AA seq
528 aa
AA seq
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MRRCYHLLDVTINIILLVLLILVVAVVVGVITFKLGVSYRKKVAESQYGSAEQKARKIVD
DAIKEAESIKRESRLEVKEETYKIKSDLDKEVKERRNELQRLERRLLQKEESLDKKAESF
ERKENQLTSREEQLAKIKAEVSELQKKHVKELEKISGLTSNQAKEYLLKSVENEVKHETA
ILIKELEVKAKEEVNKKSKEILANVIQKCAVDHVAETTVSVVPLPSDEMKGRIIGREGRN
IRTLETLTGIDLIIDDTPEAVILSGFDPIRREVARIALEKLIVDGRIHPARIEEMVEKAR
KEVENIIREEGEMATFDTGVHGLHHELTRLLGKMKFRTSYGQSVLKHSIEVSHLSGLIAG
EIGVDVRVAKRAGLLHDIGKSVDHEMEGSHVSIGADLCRKYKESDVIVNAVEAHHGDVEP
TSLVAVIVQAADAISAARPGARRETLETYIKRLQRLEEIADEFKGVDKSFAIQAGREIRI
MVVPDQTSDEEMVLLAREISKKIEDELEYPGQIKVNVIRETRAVEYAK
NT seq
1587 nt
NT seq
+upstream
nt +downstream
nt
atgaggaggtgttaccatttgttagacgttactataaatataatattactagtattgtta
atacttgtcgttgcagttgtagttggagtaataacttttaagcttggtgtttcttataga
aagaaagtggcggaatcacaatatggatcagctgaacaaaaagctagaaaaattgttgat
gatgctataaaagaagcagaatctattaaacgggaaagtcgtttagaggttaaagaagaa
acttataaaatcaaaagtgatctagataaagaagttaaagagcgaagaaatgaattacaa
cgccttgagcgacgacttcttcaaaaagaagaatctttagacaaaaaagctgaaagcttt
gaaagaaaagaaaatcagttaacatctagagaagaacaattagcaaaaataaaagcagaa
gtatctgaattacagaaaaaacatgtcaaagagttagaaaaaatttctggcctcacctcc
aatcaagcaaaagaataccttttaaaatctgttgaaaatgaagtcaaacatgaaacagca
attttaattaaagaattggaagtaaaagcaaaagaagaggttaacaaaaaatctaaagaa
atattggcgaatgtaatacaaaaatgcgcagttgaccatgttgccgaaactactgtatca
gtagtacctcttccaagtgatgaaatgaaaggaagaataataggtcgagaaggaagaaac
attagaaccttggagactttaacaggaatagatcttattattgatgatacgcctgaagca
gttatactttctggatttgatccaataagaagagaagttgcaagaattgcacttgaaaaa
ttaattgttgatggaagaatccatcctgcaagaattgaagaaatggtagaaaaagcaaga
aaagaagttgagaatattattcgtgaagaaggtgaaatggccactttcgacacaggtgtt
catggcttacaccatgaattaacgagattgttaggtaagatgaagtttagaacaagttat
ggacagagtgttttaaaacattcaatcgaggtatctcatttaagtggattaattgccggt
gaaatcggagtagatgtaagagtagctaaacgtgctggtttattacatgatattggtaaa
tcagttgaccatgaaatggaaggttcacatgtttccataggtgcagacttatgtaggaaa
tataaagaatcagatgtgattgtcaatgctgttgaagcacatcacggtgatgtagaacct
actagtctagttgctgtcattgtacaagcagctgatgctatatctgctgcaagaccaggt
gcacgacgtgaaacattagaaacatatattaagagacttcaacgtcttgaagagattgct
gatgaatttaaaggtgtcgataaatcttttgctattcaagcaggtagagaaattagaata
atggttgttcctgatcaaacaagtgatgaagaaatggtattacttgcaagagaaatttct
aagaaaatagaggatgaattggaatacccaggacaaattaaagttaatgttataagagaa
acaagagcagttgaatatgctaaataa
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