Vibrio campbellii ATCC BAA-1116: VIBHAR_00046
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Entry
VIBHAR_00046 CDS
T00589
Name
(GenBank) hypothetical protein
KO
K10917
PadR family transcriptional regulator, regulatory protein AphA
Organism
vha
Vibrio campbellii ATCC BAA-1116
Pathway
vha02024
Quorum sensing
vha05111
Biofilm formation - Vibrio cholerae
Brite
KEGG Orthology (KO) [BR:
vha00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
VIBHAR_00046
05111 Biofilm formation - Vibrio cholerae
VIBHAR_00046
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vha03000
]
VIBHAR_00046
Transcription factors [BR:
vha03000
]
Prokaryotic type
Helix-turn-helix
PadR family
VIBHAR_00046
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Vir_act_alpha_C
PadR
HTH_34
Motif
Other DBs
NCBI-ProteinID:
ABU69106
UniProt:
A7MXA8
LinkDB
All DBs
Position
I:47235..47840
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AA seq
201 aa
AA seq
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MKNANESVDSLFTSLLTIWIEDMSLPHVILTVLSTRDATGYDITKEFSASIGYFWKASHQ
QVYRELNKMAEKELVTCVLEPQEGKPDRKVYSITDAGRSALGEWFDQPTAHPTVRDEFSA
KLMACAVQPAAPFRDQLSELVEESRKLVAHYKEIEAAYYATPSTLDKQARLERLTLRRNL
MLREAWINWAEEVLTELEVIG
NT seq
606 nt
NT seq
+upstream
nt +downstream
nt
atgaagaacgcaaatgaaagtgtagatagcttgtttacaagtttattgaccatttggatt
gaagacatgtcattaccacacgtaattctaactgtacttagcactcgcgacgctaccggt
tacgacatcactaaagaattctcagctagcatcggttacttctggaaagcaagccaccaa
caagtttatcgtgaacttaataaaatggctgagaaagagctggttacttgcgtattagaa
cctcaagaaggcaagccagaccgtaaggtttactcaatcactgacgcaggccgtagcgca
ttgggcgagtggtttgatcagccaactgcacacccaactgtacgtgacgaattctcagcg
aagcttatggcttgtgccgtgcaacctgcagcgcctttccgtgaccagctgtctgagctt
gtagaagagtctcgtaaactggttgctcactacaaagaaatcgaagctgcgtactacgca
acgccatcaacgctagacaagcaagcgcgtctagagcgtctaacacttcgtcgtaaccta
atgctacgtgaagcgtggattaactgggcagaagaagtgctaacagaacttgaagtgatc
ggctaa
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