Vibrio campbellii ATCC BAA-1116: VIBHAR_00277
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Entry
VIBHAR_00277 CDS
T00589
Name
(GenBank) hypothetical protein
KO
K03089
RNA polymerase sigma-32 factor
Organism
vha
Vibrio campbellii ATCC BAA-1116
Brite
KEGG Orthology (KO) [BR:
vha00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
vha03021
]
VIBHAR_00277
Transcription machinery [BR:
vha03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
VIBHAR_00277
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
HTH_10
UCR_14kD
HTH_3
KORA
GntR
Motif
Other DBs
NCBI-ProteinID:
ABU69305
UniProt:
A7MXX9
LinkDB
All DBs
Position
I:complement(269331..270188)
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AA seq
285 aa
AA seq
DB search
MTKEAYPMALVTQDSLDSYIRSVNSYPMLTPEEERGLAERLHYKGEIDAAKGLILSHLRF
VVHVARGYSGYGLPMADLVQEGNIGLMKAVKRFNPEVGVRLVSFAVHWIKAEIHEYVLRN
WRIVKIATTKAQRKLFFNLRKSKKRLGWFNNGEVETVARELGVEPSEVREMESRLAAVDS
TFDMPMDDDDNSNSYTAPMFYLEDKSSDVADNIEAANWETHTNNRLGHALASLDERSQRI
VRSRWLDDDKATLQDLADEFGVSAERIRQLEKNAMKKLKLAVGEF
NT seq
858 nt
NT seq
+upstream
nt +downstream
nt
atgacaaaagaagcgtatccgatggctctagtcacgcaagatagccttgatagctacatc
cgttctgtaaacagctacccaatgctgacaccagaagaagagcgtgggctggcagaacga
ttacactacaaaggtgagatagatgcggcgaaaggtctgatcttgtcacacctacgattc
gttgttcacgttgctcgtggctactcaggctacggcttgccaatggcagacctagtacaa
gagggcaacatcggtctaatgaaagcggttaagcgtttcaaccctgaagtgggtgtacgt
ttggtgtctttcgctgttcactggatcaaagctgagatccatgaatacgtactgcgtaac
tggcgcatcgttaagattgcgaccaccaaagcgcaacgtaagttgttcttcaacctacgt
aagtcgaagaagcgtctgggctggttcaacaacggtgaagtagaaaccgttgctcgtgag
ttaggtgttgagccttcagaagtacgtgagatggaatcacgtttagcggcagtggactct
acgttcgatatgccaatggacgatgacgacaattcaaactcgtacaccgccccaatgttt
tacctagaagacaaatcgtctgatgtagcggataacattgaagcggcaaactgggaaacg
cacaccaataaccgtcttggccatgcgctagcaagtttagatgagcgcagccagcgtatt
gttcgctctcgttggttagacgacgacaaagcgacactgcaagacttagctgatgagttt
ggtgtttctgctgagcgtattcgtcaactagaaaagaatgcgatgaagaaactgaaactt
gctgttggtgagttctaa
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