Vibrio campbellii ATCC BAA-1116: VIBHAR_00460
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Entry
VIBHAR_00460 CDS
T00589
Name
(GenBank) hypothetical protein
KO
K01825
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
5.3.3.8
]
Organism
vha
Vibrio campbellii ATCC BAA-1116
Pathway
vha00071
Fatty acid degradation
vha00280
Valine, leucine and isoleucine degradation
vha00310
Lysine degradation
vha00362
Benzoate degradation
vha00380
Tryptophan metabolism
vha00410
beta-Alanine metabolism
vha00640
Propanoate metabolism
vha00650
Butanoate metabolism
vha00907
Pinene, camphor and geraniol degradation
vha00930
Caprolactam degradation
vha01100
Metabolic pathways
vha01110
Biosynthesis of secondary metabolites
vha01120
Microbial metabolism in diverse environments
vha01200
Carbon metabolism
vha01212
Fatty acid metabolism
Module
vha_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
vha00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
VIBHAR_00460
00650 Butanoate metabolism
VIBHAR_00460
09103 Lipid metabolism
00071 Fatty acid degradation
VIBHAR_00460
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
VIBHAR_00460
00310 Lysine degradation
VIBHAR_00460
00380 Tryptophan metabolism
VIBHAR_00460
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
VIBHAR_00460
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
VIBHAR_00460
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
VIBHAR_00460
00930 Caprolactam degradation
VIBHAR_00460
Enzymes [BR:
vha01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
VIBHAR_00460
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
VIBHAR_00460
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
VIBHAR_00460
5.3 Intramolecular oxidoreductases
5.3.3 Transposing C=C bonds
5.3.3.8 Delta3-Delta2-enoyl-CoA isomerase
VIBHAR_00460
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
DUF5546
NAD_binding_2
DAO
Motif
Other DBs
NCBI-ProteinID:
ABU69475
UniProt:
A7N1D2
LinkDB
All DBs
Position
I:complement(444049..446220)
Genome browser
AA seq
723 aa
AA seq
DB search
MIYQAETLQVKEVQDGIAELSFCSPKSVNKLDLATLESLDKALDALKAHQGLKGLMLTSD
KDAFIVGADITEFLGLFAKTDAELDQWLQFANSIFNKLEDLPVPTISVLKGHTLGGGCEC
VLATDMRIGDKTTSIGLPETKLGIMPGFGGCVRLPRVIGADSAMEVITQGKACRADEALK
IGLLDAVVDSDALYESALKTLTSAINEKLDWQARRKQKTSPLTLSKLESMMSFTMAKGLV
AQKAGPHYPAPMTAVITIEEGARFARNEALDIERKHFVKLAKSEEAKSLVGLFLNDQYIK
GLAKKSAKSASKDTQRAAVLGAGIMGGGIAYQSALKGVPVLMKDIAQPSLDLGMTEASKL
LNKRLSRGRIDGFKMAGILASITPSLHYTGIEESDVIVEAVVENPKVKAAVLSEVESHVG
EDTVITSNTSTIPINLLAKSLKRPENFCGMHFFNPVHRMPLVEIIRGEHTSDETINRVVA
YAAKMGKSPIVVNDCPGFFVNRVLFPYFGGFSMLLRDGADFTKIDKIMERKFGWPMGPAY
LLDVVGIDTAHHAQAVMAQGFPERMGKQGRDAIDALFEASKYGQKNGSGFYSYTIDRKGK
PKKTFSEEILPVLADVCTDKQDFDDQTIIQRMMIPMINEVVLCLQEGIIATPQEADMTLV
YGLGFPPFRGGVFRYLDSVGIAEFVAMAKQYSELGAMYQVPQMLIDMAAKGESFYGAQQQ
GSI
NT seq
2172 nt
NT seq
+upstream
nt +downstream
nt
atgatttaccaagccgaaaccctacaggtaaaggaagtacaagatggtattgcagaacta
agcttctgctctccaaaatccgttaacaagctcgacctagcgacactagagtcactcgac
aaagcccttgatgcactaaaagcgcaccaaggactgaagggcttgatgctcacctcagat
aaagacgcgttcattgttggcgctgatatcaccgaattcttaggtcttttcgctaagaca
gacgctgaactcgatcagtggctgcaatttgctaacagcatctttaacaagctggaagac
ttaccggttccgactatctcggtactaaaaggtcacacgttaggtggcggttgtgagtgc
gtgcttgccactgacatgcgaattggtgacaagaccaccagcatcggtctaccagagaca
aaactgggcatcatgccgggctttggtggttgtgtgcgtctgccacgtgttattggcgcc
gacagtgcgatggaagtgatcacacaaggcaaagcgtgtcgtgcggatgaggcattaaag
attggtcttctggatgcggttgtcgatagcgacgcactttacgaatcagcactcaagaca
ctgacctcggcaatcaacgagaagttggactggcaagctcgtcgtaagcaaaagacatcg
ccattgacgctaagtaagctcgaatcaatgatgagctttaccatggcgaagggtctagtg
gcacaaaaagcaggtcctcactaccctgctccaatgacagccgttattactattgaagaa
ggtgctcgctttgctcgtaacgaagcactcgacattgaacgtaagcacttcgtaaaactg
gctaagtctgaagaagcaaaatcactggttggtttattcctcaacgaccaatacatcaaa
gggcttgcgaaaaaatcagctaagtcagcgagtaaagacacgcaacgtgcagctgtactt
ggtgcgggcattatgggcggcggcatcgcctaccaatctgcattaaaaggcgtaccagtg
ttaatgaaagacatcgcgcaaccttcactcgatttaggcatgactgaagcatctaagctg
ctaaataaacgcttatctcgtggtcgcattgatggctttaagatggctggtattttagcg
tctatcacaccaagcctacattacacaggcatcgaagaatcagacgtgattgttgaagcc
gtagtagaaaacccgaaagtaaaagcagcagttttgagtgaagtggaatcacatgtcggt
gaagacacggttatcacctcaaacacctcgacgattccaatcaatctattagcgaaatcg
ctaaaacgcccagaaaacttctgtggcatgcacttcttcaacccagtgcaccgcatgcct
cttgttgagatcatccgtggtgaacatacctctgatgaaaccatcaaccgtgttgttgcg
tacgcagcgaaaatgggtaaatcaccaattgtcgttaatgactgccctgggttctttgta
aaccgcgtgttgttcccatactttggtggcttcagcatgctacttcgagacggtgctgac
tttacgaaaatcgacaaaatcatggaacgtaagtttggctggccgatgggacctgcatac
ttgctcgatgttgttggtattgatactgctcaccacgcacaagccgttatggcgcaaggt
ttcccagagcgtatgggcaaacaaggtcgtgatgcgatcgatgcactgttcgaagcaagc
aaatacggtcagaagaatggcagtggcttctacagctacaccatagatagaaaaggtaag
ccgaagaaaaccttctctgaagagatcttgccggtgctcgctgacgtttgtaccgataag
caggactttgacgatcaaaccatcattcaacgtatgatgattccaatgatcaacgaagtg
gtattgtgtctacaagaaggcatcattgccactccacaagaagcggatatgacattggtt
tacggtcttggtttccctccattccgcggcggcgtattccgctacctagatagcgtaggt
attgctgagtttgttgcaatggcaaaacaatactcagagcttggtgctatgtaccaagta
ccgcagatgctgattgatatggcggcgaaaggtgaaagcttttacggtgcacaacagcaa
ggttctatctaa
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