KEGG   Vibrio campbellii ATCC BAA-1116: VIBHAR_00629
Entry
VIBHAR_00629      CDS       T00589                                 
Name
(GenBank) hypothetical protein
  KO
K03060  DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
Organism
vha  Vibrio campbellii ATCC BAA-1116
Pathway
vha03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:vha00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    VIBHAR_00629
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:vha03021]
    VIBHAR_00629
   03400 DNA repair and recombination proteins [BR:vha03400]
    VIBHAR_00629
Enzymes [BR:vha01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     VIBHAR_00629
Transcription machinery [BR:vha03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     VIBHAR_00629
DNA repair and recombination proteins [BR:vha03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      VIBHAR_00629
SSDB
Motif
Pfam: RNA_pol_Rpb6 DUF1599
Other DBs
NCBI-ProteinID: ABU69631
UniProt: A7MSR0
LinkDB
Position
I:complement(618514..618693)
AA seq 59 aa
MARVTVQDAVEKVGNRFDLVLIAARRARQMQTGGKDALVPEENDKPTDRSTRNRRRFNY
NT seq 180 nt   +upstreamnt  +downstreamnt
atggcacgcgtaactgttcaagacgctgttgaaaaagttggcaaccgtttcgacctagta
ctgattgcggctcgccgcgctcgtcaaatgcaaactggcggtaaagatgcactagtgcca
gaagagaacgataagccaacggatcgctctacgcgaaatcgaagaaggtttaattactaa

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