Vibrio campbellii ATCC BAA-1116: VIBHAR_00682
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Entry
VIBHAR_00682 CDS
T00589
Name
(GenBank) hypothetical protein
KO
K03274
ADP-L-glycero-D-manno-heptose 6-epimerase [EC:
5.1.3.20
]
Organism
vha
Vibrio campbellii ATCC BAA-1116
Pathway
vha00540
Lipopolysaccharide biosynthesis
vha01100
Metabolic pathways
vha01250
Biosynthesis of nucleotide sugars
Module
vha_M00064
ADP-L-glycero-D-manno-heptose biosynthesis
Brite
KEGG Orthology (KO) [BR:
vha00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
VIBHAR_00682
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
vha01005
]
VIBHAR_00682
Enzymes [BR:
vha01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.20 ADP-glyceromanno-heptose 6-epimerase
VIBHAR_00682
Lipopolysaccharide biosynthesis proteins [BR:
vha01005
]
Core region
VIBHAR_00682
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Epimerase
GDP_Man_Dehyd
3Beta_HSD
RmlD_sub_bind
Polysacc_synt_2
ThiF
adh_short
NAD_binding_4
KR
Phage_T7_Capsid
NAD_binding_10
Motif
Other DBs
NCBI-ProteinID:
ABU69684
UniProt:
A7MSM1
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All DBs
Position
I:complement(666396..667337)
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AA seq
313 aa
AA seq
DB search
MIIVTGGAGMIGSNIVKALNEAGINDILVVDNLKNGKKFKNLVDLDITDYMDRDDFLTQI
MAGDDFGPIEAIFHEGACSATTEWDGKYMMLNNYEYSKELLHYCLDREIPFLYASSAATY
GETETFVEEREYEGALNVYGYSKQQFDNYVRRLWKDAEEHGEQLSQITGFRYFNVYGPRE
DHKGSMASVAFHLNNQINAGENPKLFAGSESFKRDFVYVGDVCKVNLWFLENGVSGIFNC
GTGRAESFEEVAKAVVKHHNKGEIQTIPFPDHLKGAYQEFTQADLTKLRAAGCDVEFKTV
AEGVAEYLAIQNR
NT seq
942 nt
NT seq
+upstream
nt +downstream
nt
atgatcatcgtaactggtggtgctggcatgatcggcagcaacattgttaaagctctgaac
gaagcaggtattaacgatattctggttgtcgacaacctaaaaaatggcaagaagtttaaa
aacttagttgatcttgatatcactgattacatggatcgtgacgacttccttacccaaatc
atggcaggtgacgacttcggtcctatcgaagctatcttccatgagggtgcttgttctgcg
acaaccgagtgggacggcaaatacatgatgctaaacaactatgagtactcaaaagagtta
cttcattactgtctagatcgtgaaattccattcctatacgcgtcatcagctgcgacatac
ggtgagacagaaacgttcgttgaagagcgtgaatacgaaggggcacttaacgtatacggc
tactcaaaacagcagtttgataactacgttcgtcgcctatggaaagatgcagaggaacat
ggcgagcagctttctcaaatcactggtttccgttacttcaatgtatatggcccacgggaa
gatcacaaaggcagcatggcgtcagtagccttccacttaaataaccagatcaatgctggt
gaaaaccctaagttatttgcgggcagcgaatcattcaaacgcgacttcgtttacgtcggt
gatgtgtgcaaagtaaacctttggttcctagaaaatggtgtttctggcatcttcaactgc
ggtactggtcgtgcagaatcttttgaagaagtggcaaaagcagtagtcaaacaccacaac
aaaggtgaaatccaaaccattccgttccctgatcacctaaaaggcgcttaccaagaattc
actcaagcggacctaactaagcttcgtgcagctggttgtgatgtagaattcaaaacggtg
gctgagggtgttgctgaatacctagcgattcaaaaccgttaa
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