Vibrio campbellii ATCC BAA-1116: VIBHAR_00762
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Entry
VIBHAR_00762 CDS
T00589
Name
(GenBank) hypothetical protein
KO
K05591
ATP-dependent RNA helicase DbpA [EC:
5.6.2.6
]
Organism
vha
Vibrio campbellii ATCC BAA-1116
Brite
KEGG Orthology (KO) [BR:
vha00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
vha03009
]
VIBHAR_00762
Enzymes [BR:
vha01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
VIBHAR_00762
Ribosome biogenesis [BR:
vha03009
]
Prokaryotic type
rRNA helicases
VIBHAR_00762
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
Cas3-like_C_2
ALMT
CMS1
AAA_30
Helicase_C_2
PRAI
UPF0180
UvrA_inter
Motif
Other DBs
NCBI-ProteinID:
ABU69763
UniProt:
A7MWG0
LinkDB
All DBs
Position
I:741329..742708
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AA seq
459 aa
AA seq
DB search
MSKQTFDQVGLNPALLETLESLNYTHMTPIQALSLPAILNQRDVIGQGKTGSGKTAAFGL
GVLSNLNVKRFRVQSLVLCPTRELADQVAKEIRTLGRGIHNIKVLTLCGGMPMGPQIGSL
EHGAHILVGTPGRILDHLEKGRINLEELNTLVLDEADRMLEMGFQDALDAIIDAAPKQRQ
TLLFSATFPEKIEQIAQRIMQSPEMIKVESTHDTSSIAQYFYNVEGSEARDEALANLLLT
HQPESAVVFCNTKKEVQNVADELHHKGFSVVDLHGDLEQRERDQALVQFANKSVSILVAT
DVAARGLDVDNLDAVFNFELSRDPEVHVHRIGRTGRAGSKGLAFSFFGEKDGLRVARIEE
YLEMDVVPATLPAKSTQQPYQAKMVTINIDGGKKQKVRAGDILGCLTGKNGITGAQVGKI
QLMAMRSYVAVEKSLAKKALQTISNGKMKGRQFRARILK
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
gtgagcaaacagacttttgaccaagtagggcttaatccagcgctactagagacgcttgaa
tcattgaactacacccatatgacgccaattcaagcgttgagcttacctgcgattttgaat
cagcgtgatgtgattggtcagggcaaaacaggctcaggtaaaacggcggcatttggtttg
ggcgtattgtccaacctaaacgtgaagcgcttccgtgtacaatctttggtgttgtgccca
acgcgtgaactggctgatcaggtggcgaaagagatccgtacgttaggtcgtggtattcac
aacattaaagtactgacactatgtggcggcatgccaatgggaccgcaaatcggttcacta
gagcatggtgctcatattctggtgggtacgccaggtcgtatccttgatcacctagagaaa
ggtcgcattaacctagaagagctaaacacgctggttctagatgaagcagaccgcatgctg
gagatgggcttccaagacgcccttgatgcgatcattgatgctgcgcctaaacaacgtcaa
acactgctattcagtgcgactttccctgagaagatcgaacagattgctcaacgtattatg
caatcgccagagatgatcaaagtagaatcgacacacgatacgtcgagcatcgcgcaatac
ttttacaacgttgaaggctcagaagcacgcgatgaagctttggcgaacctactactgacg
caccagccagagtcagcggtggtgttctgtaataccaagaaagaagtacagaatgtagca
gatgaactgcatcacaaaggcttcagtgtggtggatcttcatggcgatctagaacagcgt
gagcgcgaccaagctctagtccagtttgctaacaagagtgtctctatccttgttgcaaca
gacgtggcggcgcgtggtttggatgtcgacaaccttgatgcagtatttaacttcgaactg
tctcgtgaccctgaagtacacgttcaccgtatcggccgtactggtcgtgcgggcagcaaa
ggtctggcgttcagtttctttggtgagaaagatggtctacgtgtggctcgtattgaagag
tacctagagatggatgtggtaccagcaacactgccagcgaaatcaactcagcaaccatac
caagcgaagatggtgacgattaatatcgatggcggtaagaaacagaaagtacgtgcgggt
gacatccttggttgtttgaccggtaaaaatggtatcacgggtgcacaagtgggtaagatc
cagctaatggcgatgcgttcttatgttgcggtagagaaatctttggcgaagaaagcactg
caaaccatcagcaacggtaagatgaaaggtcgtcaattccgtgctcgtattctgaagtaa
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