Vibrio campbellii ATCC BAA-1116: VIBHAR_00848 Help Entry VIBHAR_00848      CDS       T00589                                  Name (GenBank) hypothetical protein   KO K03086   RNA polymerase primary sigma factor Organism vha  Vibrio campbellii ATCC BAA-1116 Pathway vha02040   Flagellar assembly Brite KEGG Orthology (KO) [BR:vha00001]  09140 Cellular Processes   09142 Cell motility    02040 Flagellar assembly     VIBHAR_00848  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:vha03021]     VIBHAR_00848 Transcription machinery [BR:vha03021]  Prokaryotic type   Bacterial type    RNA polymerase     Sigma factors      VIBHAR_00848 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Sigma70_ner Sigma70_r3 Sigma70_r1_1 Sigma70_r2 Sigma70_r4 Sigma70_r1_2 TMPIT COMM_domain Motif Other DBs NCBI-ProteinID:  ABU69848 UniProt:  A7MWQ8 LinkDB All DBs Position I:complement(835910..837772) Genome browser AA seq 620 aa AA seqDB search MDQNPQSQLKLLVIKGKEQGYLTYAEVNDHLPAEIVDSEQVEDIIQMINDMGIKVVETAP DADDLALNDDTNITDEDAAEAAAAALSSVESEIGRTTDPVRMYMREMGTVELLTREGEID IAKRIEEGINQVQSSVAEYPGTIPYILEQFDKVQAEELRLTDLISGFVDPDADDTAAPTA THIGSELTESQLEEEDEEDVDDDEESDDDSDDSEEDVGIDPELALEKFNQLRSTYQNLQL AINEHGYESPKATVANELMLDVFKEFRLTPKQFDHLVNELRTAMDRVRTQERLIMKSAVE YGKMPKKSFIALFTGNESSEAWLDEILASDKPYAEKIKRNEEEIRRSIAKLKMIEEETSL NVQNIKDISRRMSIGEAKARRAKKEMVEANLRLVISIAKKYTNRGLQFLDLIQEGNIGLM KAVDKFEYRRGYKFSTYATWWIRQAITRSIADQARTIRIPVHMIETINKLNRISRQMLQE MGREPLPEELAERMQMPEDKIRKVLKIAKEPISMETPIGDDEDSHLGDFIEDTTLELPLD SATATSLKMATKDVLAGLTPREAKVLRMRFGIDMNTDHTLEEVGKQFDVTRERIRQIEAK ALRKLRHPSRSETLRSFLDE NT seq 1863 nt NT seq  +upstreamnt  +downstreamnt atggatcaaaatccgcagtcacagctaaagttacttgttattaaaggcaaggaacaaggc tatctgacctacgccgaagtaaatgaccacctacctgctgaaatcgtagattcagaacag gtagaagacatcattcagatgatcaacgacatgggtatcaaggtagtagaaactgctcct gatgccgatgatctagcgctgaacgatgacacaaacattaccgatgaagatgcagctgaa gctgcagcagcagcactttctagcgtagaaagtgaaattggtcgtacaacagacccagtg cgcatgtacatgcgtgaaatgggtactgtggagctgctgactcgcgaaggcgaaatcgac atcgcaaaacgtattgaagaaggtattaaccaagttcaatcgtctgttgctgaataccct ggcactatcccatacattcttgagcagtttgataaagttcaagcagaagaacttcgtcta acagacctaatctctggatttgttgaccctgatgcagacgatacagctgcaccaacagca acgcacatcggttctgagctgactgaatctcagctagaagaagaagatgaagaagacgtt gatgacgacgaagaaagcgatgacgattcagatgattctgaagaagatgttggtatcgac ccagagctagcgcttgagaaattcaaccagctacgcagcacataccaaaaccttcagctt gcaatcaacgaacacggttacgagagccctaaagcgaccgtagctaacgagttgatgcta gacgtattcaaagaattccgtctaacgccaaaacagttcgatcacctagtgaatgaactg cgcacagcaatggatcgcgttcgtactcaagaacgtctgatcatgaagtctgcagttgaa tacggcaaaatgccgaagaaatcattcatcgcgctgttcacaggcaacgaatcaagcgaa gcatggctagatgagatcctagcatctgacaagccatacgctgaaaagatcaaacgtaac gaagaagaaatccgtcgttcaatcgctaaactaaaaatgattgaagaagagacttctcta aacgttcaaaacattaaagacatcagccgtcgcatgtctatcggtgaagcaaaagctcgc cgtgcgaagaaagagatggttgaagcgaacttacgtctagtaatttctatcgcgaagaaa tacaccaaccgtggtctacagttcttggatctaatccaagaaggtaacatcggtctgatg aaagcggtagataagttcgaataccgtcgtggttacaagttctcgacttacgcaacgtgg tggatccgtcaggccatcactcgttcaatcgcggaccaagcacgtacgattcgtatcccg gtacacatgatcgaaacgatcaacaagctaaaccgtatctctcgtcaaatgctgcaagag atggggcgtgagccattaccggaagaactggcagagcgtatgcaaatgccagaagacaag attcgtaaagtactgaaaatcgctaaagagccaatctctatggagacaccaattggtgac gacgaagattcgcatctaggtgatttcatcgaagatactacgctagaactaccgctagat tctgctacggcaacgagcctgaaaatggcaacgaaagacgtacttgcaggtctaacgcca cgtgaagcaaaagtacttcgtatgcgctttggtatcgacatgaacactgaccacactcta gaagaagttggtaagcagttcgacgttactcgtgaacgtatccgtcagatcgaagcgaaa gcactacgtaaacttcgtcacccaagccgctcagaaacactgcgcagcttcctagacgag taa

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