Vibrio campbellii ATCC BAA-1116: VIBHAR_01220
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Entry
VIBHAR_01220 CDS
T00589
Name
(GenBank) hypothetical protein
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
vha
Vibrio campbellii ATCC BAA-1116
Pathway
vha03030
DNA replication
vha03430
Mismatch repair
vha03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
vha00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
VIBHAR_01220
03430 Mismatch repair
VIBHAR_01220
03440 Homologous recombination
VIBHAR_01220
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
vha03032
]
VIBHAR_01220
03400 DNA repair and recombination proteins [BR:
vha03400
]
VIBHAR_01220
Enzymes [BR:
vha01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
VIBHAR_01220
DNA replication proteins [BR:
vha03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
VIBHAR_01220
DNA repair and recombination proteins [BR:
vha03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
VIBHAR_01220
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delt_C
DNA_pol3_delta
DNA_pol3_delta_C
Motif
Other DBs
NCBI-ProteinID:
ABU70209
UniProt:
A7MY84
LinkDB
All DBs
Position
I:complement(1239151..1240170)
Genome browser
AA seq
339 aa
AA seq
DB search
MRIFADKLADHLAKHIKQVYLIFGNEPLLIQESRQAIQNMARQQGFEERHRFAVDASLDW
NQVYDCFQALNLFSSRQLIELELPEAGANAAISKELVNLCEMLHDDIMLVVVGSKLTKAQ
ENAKWFKALSAKGDWVSCLTPDLQRLPMFVQARCRALGLKADQQSLQMLAQWHEGNLFAL
SQSLEKLALLYPDGELTVVRLEEALSRHNHFTTFHWIDALLAGKANRAQRILRQLEAEGI
ETIILIRSVQKEFNQLLNMHRDLIQMGMSQVFEKHRVWQNKRPFYNAALTRLSASRICAL
LSLLAHAEIKAKTQYDDSVWPTIHQLSLETCSPDIKLAI
NT seq
1020 nt
NT seq
+upstream
nt +downstream
nt
atgcgaatttttgccgacaagctggctgatcacctagcgaaacacatcaagcaggtttac
ctgatctttggtaacgaaccgctgttaattcaagaaagccgtcaagcgatccaaaacatg
gctcgccaacaaggctttgaagaaagacaccgttttgccgtcgacgccagcttagattgg
aatcaagtctatgactgcttccaagcgctaaacctattctctagccgtcaactgattgag
cttgaactaccagaggctggtgcaaacgcagccatcagtaaagaactggtcaatctgtgc
gaaatgctccatgacgacatcatgttagtggtggttggcagcaaactgactaaagcacaa
gaaaacgctaaatggttcaaagcactgagtgccaagggtgactgggtaagttgtctgaca
cctgatttgcagcgactgccaatgttcgtgcaggcacgttgccgagcgttgggattaaaa
gcggatcagcaatctctgcaaatgttggcacaatggcacgaaggtaatttgttcgcgcta
tcgcaaagtttagaaaagctagctttactctacccagatggcgagctgacggtagtgcgt
cttgaagaagcgctgagccgccacaatcactttacgacgttccattggattgacgctcta
ctagcaggtaaagcaaaccgcgcgcagcgcattctgcgacagctagaggcggaaggcatc
gaaaccatcattctgatccgaagcgtacagaaagagttcaaccaactactaaacatgcac
cgagaccttattcaaatgggcatgagtcaggtgtttgaaaaacatcgagtgtggcaaaac
aaacgcccattctataatgcagcgctgactcgtctgtcagcctcccgaatttgtgcactt
ttgtctcttttggcgcacgccgagataaaagccaaaacccaatatgatgactctgtgtgg
ccaactatccatcaattgagcctagaaacctgctctcctgatattaagctggcaatttag
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