Vibrio campbellii ATCC BAA-1116: VIBHAR_01420
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Entry
VIBHAR_01420 CDS
T00589
Name
(GenBank) hypothetical protein
KO
K03530
DNA-binding protein HU-beta
Organism
vha
Vibrio campbellii ATCC BAA-1116
Brite
KEGG Orthology (KO) [BR:
vha00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
vha03032
]
VIBHAR_01420
03036 Chromosome and associated proteins [BR:
vha03036
]
VIBHAR_01420
03400 DNA repair and recombination proteins [BR:
vha03400
]
VIBHAR_01420
DNA replication proteins [BR:
vha03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
VIBHAR_01420
Chromosome and associated proteins [BR:
vha03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
VIBHAR_01420
DNA repair and recombination proteins [BR:
vha03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
VIBHAR_01420
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_2
ACP_syn_III_C
Arteri_nsp7a
GTP_EFTU_D2
Nup214_FG
HU-CCDC81_euk_1
DUF7342
Barstar
Motif
Other DBs
NCBI-ProteinID:
ABU70395
UniProt:
A7MV85
LinkDB
All DBs
Position
I:1438512..1438784
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AA seq
90 aa
AA seq
DB search
MNKTQLVEQIAENADISKASAGRALDAFIDAVSGTLQSGDQVALVGFGTFSVRTRAARTG
RNPKTGDEIQIAEAKVPSFKAGKALKDACN
NT seq
273 nt
NT seq
+upstream
nt +downstream
nt
gtgaataaaactcaactagtagaacaaatcgcagaaaacgcagacatctctaaagcatca
gctggtcgcgctctagacgcattcatcgatgcagtgagtggtacgcttcagtctggtgat
caagttgctcttgttggcttcggtacattcagcgtccgtactcgtgcagcgcgcactggc
cgcaacccaaaaactggtgatgaaatccaaatcgcggaagctaaagtaccttctttcaaa
gctggtaaagctctaaaagacgcttgtaactaa
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