Vibrio campbellii ATCC BAA-1116: VIBHAR_01454
Help
Entry
VIBHAR_01454 CDS
T00589
Name
(GenBank) hypothetical protein
KO
K20957
diguanylate cyclase [EC:
2.7.7.65
]
Organism
vha
Vibrio campbellii ATCC BAA-1116
Pathway
vha05111
Biofilm formation - Vibrio cholerae
Brite
KEGG Orthology (KO) [BR:
vha00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
05111 Biofilm formation - Vibrio cholerae
VIBHAR_01454
Enzymes [BR:
vha01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.65 diguanylate cyclase
VIBHAR_01454
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GGDEF
SBP_bac_3
STAR_dimer
SBP_bac_6
SBP_bac_11
Motif
Other DBs
NCBI-ProteinID:
ABU70425
UniProt:
A7MZR4
LinkDB
All DBs
Position
I:1470331..1472328
Genome browser
AA seq
665 aa
AA seq
DB search
MVKVVQRLLVFACFLLSLSLKAEPEYVSHYKVATEADDVVTRVLFDAVAEKFGVSIEYVN
YSSFDGILDSVARGESDFAANITFTQERAQKFSYSRPTNIEYTYLYGLSGMTLSEANVVG
VPKGTIYEALIQQNYPELLLVPYQGHEEAVSLLRSRKVDGVVDAINQLKPMLLEGFDATL
LNDHISIKPVSIVSQKGAHLEVLAQFADFIHSEEVQKLLREKVALYQFKLRQTALRESIK
QLPIDLEKPFTIKFESIFPYVVYRSDGSLEGMTADVVLKSCEILALNCVVISKPNESWES
MYNQFIEGEFDMLAPLTISRERRAFSYFPEYHYQPTSIMVKRLGYKPNVYSHVSQLISER
IGVVKDDFFDQMLTQMLPLKELNRFDSQQAMLDALLAREIDYIAMDTAMLNHFLRLSELI
PIEQDDAIGEFYQSELSVGLTNNERGKILAPYFSRAISMLDLEKIVAQYDLRPDWRTALE
YEVRLATQTQAVFIFVLVFALGVSLYLYRQSNTDNLTGLRNRRSLQVKYRQGVPKDLAIL
YLDINKFKQINDTYGHRAGDKVLQLLSLKIHRVWTGRSYRIGGDEFILLGYPTEMQLARA
IEELNCLEVKEELFGDLSQVTISVGVSAKRERSVSLEQALHLADEDMYSSKQASRDCKES
TPCLV
NT seq
1998 nt
NT seq
+upstream
nt +downstream
nt
atggttaaagtagttcaaaggctgttggtttttgcttgctttctattgagcctgagtctc
aaagcagaaccagagtatgtctcccattataaggtagcgacagaagcggatgatgtcgtt
acacgtgtcctgtttgatgcggtggcggaaaaatttggtgtctcaattgaatatgttaat
tattcgagctttgatgggattttagattctgttgctcgcggtgaaagtgatttcgctgcg
aatatcactttcacccaagaacgcgctcagaagttcagttattcacgcccaaccaatatt
gagtacacctatctttatggtttgagcggcatgacactgagtgaagcgaatgttgttggt
gtgcctaaaggcaccatctacgaagcgctgatccagcaaaactatccagagttgcttcta
gtgccatatcaagggcatgaagaagcggtgtcattgcttcgctctcgtaaggttgatggc
gtagtggatgccatcaaccagctcaagcctatgctattagaagggtttgatgcgacactg
ctgaatgaccatatctcaatcaaacccgtttctattgtgagtcagaaaggcgcgcacctc
gaagttcttgcacagtttgctgactttattcatagcgaagaagttcagaaattgctgcga
gagaaggtagccttgtaccaattcaaactgagacaaaccgcgttacgtgaatcaattaag
cagttgcctatcgatctcgaaaaaccgtttacgattaaatttgaatctattttcccttat
gtggtttatcgctcagatggaagcttagaggggatgaccgccgatgtggtgcttaagagt
tgtgaaatcttggctctgaattgcgtggtgatcagcaaaccaaacgagagctgggaatcg
atgtataaccagttcattgaaggggagttcgatatgcttgcgccgctgaccatcagccgt
gagcgacgtgcgttcagttacttccctgagtaccattatcaaccaacctctataatggta
aaacgccttggatacaagccaaatgtgtattctcatgtgtcccaattgatatcagagcgc
attggtgtcgtgaaggatgatttctttgatcagatgctgacgcaaatgttgccattaaag
gaactgaatcgttttgattcacagcaggcgatgttggatgcgctacttgccagagagatt
gactacattgcaatggacaccgcgatgctcaatcacttcctgcgtcttagtgaactgatt
cctattgaacaagatgatgcgattggtgagttctaccagtctgaattgtctgttggttta
acgaataatgaacgtggcaaaattctcgccccgtattttagtcgtgcgatttctatgttg
gatctggaaaagattgttgcccaatacgatttgaggccagactggcgtacggcactggag
tacgaagttcgcttagcaacccaaacgcaagcggtgtttatttttgtgctggtgttcgcg
ctgggtgtcagtctgtatttgtaccgtcagtcgaacaccgacaatttaactgggcttaga
aatcgccgctctttacaggtgaaataccgccaaggtgtaccgaaagatcttgctattttg
taccttgatatcaataaatttaagcaaatcaatgatacctacggacacagagccggggat
aaggtactacagttgctgtcgctaaaaatacatcgagtatggacgggtaggagctatcgt
attggtggtgacgagtttattttgctcggctatccgacggagatgcagctagcgagggca
atagaagagcttaactgcctagaggtaaaagaggagctatttggtgatttaagccaagta
acgatttccgttggtgtttctgctaagcgtgagcgcagtgtcagtcttgaacaagcattg
cacctcgcagatgaagatatgtactcaagtaagcaagcatctcgtgattgcaaggaatca
actccttgtctagtttga
DBGET
integrated database retrieval system
