Vibrio campbellii ATCC BAA-1116: VIBHAR_02308
Help
Entry
VIBHAR_02308 CDS
T00589
Name
(GenBank) hypothetical protein
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
vha
Vibrio campbellii ATCC BAA-1116
Pathway
vha03030
DNA replication
vha03430
Mismatch repair
vha03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
vha00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
VIBHAR_02308
03430 Mismatch repair
VIBHAR_02308
03440 Homologous recombination
VIBHAR_02308
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
vha03032
]
VIBHAR_02308
03400 DNA repair and recombination proteins [BR:
vha03400
]
VIBHAR_02308
Enzymes [BR:
vha01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
VIBHAR_02308
DNA replication proteins [BR:
vha03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
VIBHAR_02308
DNA repair and recombination proteins [BR:
vha03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
VIBHAR_02308
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_T
Motif
Other DBs
NCBI-ProteinID:
ABU71270
UniProt:
A7N0P0
LinkDB
All DBs
Position
I:2306097..2306750
Genome browser
AA seq
217 aa
AA seq
DB search
MVTLNSQGVAMKKLSTENAIIIDTETTGLGSDTEIIEFTAICADSGKVIVNELVKPTCSI
PAEATAIHGITDEDVKDAPDFHLVFSNYFLPLLNGRPIIIYNSDFDTRLIIQSLDKHCNA
AYVQSVHDLFFKFCVPQCAMLWYAEFFGVLNEHHEDYKWQSLTNACAQQQVDVSDLTAHR
ALADCEMTRRLIHAVNSQIENQNNQSCDGVTKYSSKA
NT seq
654 nt
NT seq
+upstream
nt +downstream
nt
gtggtcactctaaacagtcaaggtgttgctatgaaaaaactgtctactgaaaatgcgatc
attatcgatacagaaaccacaggcttaggctctgatacagaaattatcgagttcactgct
atctgtgctgattctggcaaagttatcgttaacgaacttgttaaaccaacttgttcaatt
cctgcagaagctacagcaattcacggcatcaccgacgaagacgttaaagacgcgcccgac
tttcatttagtcttttcaaattactttcttccgcttcttaatggtcgtccaatcatcatc
tacaactcagattttgatacgcgcttaatcatccaatctttggacaagcactgtaacgct
gcttacgtccaatccgttcacgatttgtttttcaaattttgtgttcctcagtgcgcaatg
ctttggtacgcagagttcttcggtgttttgaatgaacaccatgaagattacaagtggcaa
tctctaactaacgcctgtgctcaacaacaagttgatgtgtctgacttaaccgcgcaccga
gctctggccgattgcgaaatgactcgtcgattaattcatgctgttaactcacagattgaa
aaccaaaataatcaaagctgtgacggtgtcaccaagtatagttcaaaggcataa
DBGET
integrated database retrieval system
