Vibrio campbellii ATCC BAA-1116: VIBHAR_02421
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Entry
VIBHAR_02421 CDS
T00589
Name
(GenBank) hypothetical protein
KO
K21405
sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
Organism
vha
Vibrio campbellii ATCC BAA-1116
Brite
KEGG Orthology (KO) [BR:
vha00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vha03000
]
VIBHAR_02421
Transcription factors [BR:
vha03000
]
Prokaryotic type
Helix-turn-helix
Other families
VIBHAR_02421
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
GAF
AAA_lid_14
AAA_2
AAA_5
HTH_8
Mg_chelatase
HTH_30
AAA
MCM
nSTAND6
PAS_GdpP
AAA_3
AAA_19
Diguanyl_cycl_sensor
HTH_7
PAS_9
HTH_29
HTH_50
HTH_23
Sin3_corepress
HTH_28
Motif
Other DBs
NCBI-ProteinID:
ABU71383
UniProt:
A7MZM1
LinkDB
All DBs
Position
I:2433385..2435148
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AA seq
587 aa
AA seq
DB search
MELQHITNSNWLSTSWDRSEQAGLKQRRRPDDIRVTSAFLEDRRHQLNFLIDAVKQFALP
LFNQLFTHSDSRLILTDAEGVIIGSWGQPKFREKLTEIALNSGACWQEKLKGTNAIGTAL
VEAKPVSVIGDQHFIQHHRFISCSASPIFDHLGHLIGVLDITSEQKKHDFSTQVLVQNMV
QQVENQLLNQIPQGHIRVDLACEQGLLNSGWQGIIIANEEGQILAHNQVASQLLDQTNVV
GQQLASILDDSASNQSLVFKTQPLSERKASSRAISASNDLHYGDTTVEHCWQQANRVIDK
DISLLILGETGVGKNEFVKALHENSQRKNGPLASVNCGALPKDLVESELFGYVAGAFTGA
NNKGYQGKIRQAHKGILFLDEIADLPLEAQSRLLHVLQDKTVLPVGSNQTIQVDTQIIAA
THKDLERLVEQGEFRQDLYYRLNGLIVELPRFQERSDKQALIENIHRRHAESEQSICPHL
LSLMLGYGWPGNLRELDSLIKVSALMAQGEAQLELSHVPNHLAKKLSQASVIGEVGTSKT
RDMRTTVEDKLVKTYQANQGNISKTSRMLGLSRNTIYRKLKSLGMLK
NT seq
1764 nt
NT seq
+upstream
nt +downstream
nt
atggaacttcaacacattaccaacagcaattggctttccacctcatgggacagaagtgag
caagccggtttaaaacagcgacgtcgaccagacgatattcgtgtaacttccgcgtttctt
gaagacagacgccaccagctcaacttcttaatcgatgcggtaaaacaattcgctctgcct
ctgtttaaccagttgtttacgcacagcgacagtcgcctaatattgaccgatgcggaaggt
gtgatcattggaagttggggacaacccaaattccgcgaaaagttgaccgagattgcactc
aactctggcgcatgctggcaagaaaagctcaaaggtacgaatgccattggtacagcttta
gtagaagcaaaacccgtttctgtgattggtgaccaacacttcatacaacatcaccgtttc
atcagttgttcggcaagccctatctttgatcatttgggtcacttgattggggttctggac
atcaccagtgaacaaaagaagcatgacttttcaacgcaagttttagtgcaaaacatggtt
caacaagtggaaaatcaactgctcaaccaaattcctcaagggcatattcgagtggattta
gcttgtgagcaaggtctactgaatagcggttggcaaggcatcatcatcgccaatgaagag
ggtcagattctggctcataaccaagttgcctcacaactgctggatcaaaccaacgttgtt
ggacaacaactcgcctccatactcgacgattctgccagtaaccaatctttagtcttcaag
actcagccactatcggagcgaaaagcatcatcccgtgccatttctgcctcaaatgacctg
cattacggcgataccaccgtcgagcactgttggcagcaagccaatcgcgttatcgataaa
gacattagcttgttgatccttggcgaaacgggcgtaggtaaaaatgagttcgttaaagct
ctgcacgaaaatagccagagaaaaaacggccccttggcttccgtgaactgcggcgcgctg
ccaaaagacttggtcgaatccgaactttttggttatgtcgcaggtgcattcaccggagca
aacaacaaaggctatcaaggtaagatccgtcaagcgcacaaaggcatcttgttcttagat
gaaatcgcagacttaccattagaagcgcaaagtcgactgctgcatgtgctccaagacaaa
accgtgttgcctgtcggctcaaaccaaaccattcaagtggatacacaaatcatcgccgca
acacacaaagacttagagcgattggttgaacaaggtgaatttcgtcaggatctttattac
cgcctaaacgggctcatcgttgagttgcctcgtttccaagagcgtagcgacaaacaagca
ctgattgagaacattcatcgtcgtcacgccgagtctgaacaaagcatttgccctcacctg
ctgtcattaatgttgggatatggttggccggggaatctacgtgagctcgacagcttaatc
aaagtgtcagccttaatggcgcaaggagaagcgcaactcgagcttagccacgtacctaac
catcttgccaaaaagctaagccaagcaagcgttatcggagaagtgggtacgtcaaaaacc
agagacatgcgtacgactgtggaagataagttggtgaaaacctaccaagcaaaccaaggc
aacatcagtaaaacctcacgcatgttgggtctgagccgcaataccatttatcgcaagctc
aagagccttggcatgctgaaatga
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