Vibrio campbellii ATCC BAA-1116: VIBHAR_02456
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Entry
VIBHAR_02456 CDS
T00589
Name
(GenBank) hypothetical protein
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
vha
Vibrio campbellii ATCC BAA-1116
Pathway
vha03030
DNA replication
vha03430
Mismatch repair
vha03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
vha00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
VIBHAR_02456
03430 Mismatch repair
VIBHAR_02456
03440 Homologous recombination
VIBHAR_02456
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
vha03032
]
VIBHAR_02456
03400 DNA repair and recombination proteins [BR:
vha03400
]
VIBHAR_02456
Enzymes [BR:
vha01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
VIBHAR_02456
DNA replication proteins [BR:
vha03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
VIBHAR_02456
DNA repair and recombination proteins [BR:
vha03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
VIBHAR_02456
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
ABU71418
UniProt:
A7MZL0
LinkDB
All DBs
Position
I:complement(2470822..2471571)
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AA seq
249 aa
AA seq
DB search
MMWFSKQKQNSLDLLDTSQTPDWPIYFKQLAEQAKDTRLKRYYSAPIVNGDTPLKEVPFV
SVDFETTGLNAEQDAILTIGLVPFTLGRVQCSGSRHWVVNPNRELNEESVVIHGITDSEV
KNAPQLEQILDAILDELAGKIVVVHYKSIERQFFKNALLNSLGEGIQFPVVDTLDIEYAI
QRRECEGWLNKLKGKKPGSVRLGHARERYHLPSYQPHHALTDALATAELLQAQLQYHFDG
DMPLSVIWQ
NT seq
750 nt
NT seq
+upstream
nt +downstream
nt
atgatgtggttttcgaaacaaaagcaaaacagtctcgatttgcttgataccagccagaca
cccgattggccgatctactttaagcaacttgccgagcaagcgaaagatactcgattaaaa
cgctattactctgcgcctattgtgaatggtgatacgccattaaaagaggtaccgtttgtc
tccgtcgatttcgagaccacgggtttgaacgccgagcaagacgccattctcaccatcggt
ttagtgccatttacgctagggcgagtgcagtgcagcggatctcgccattgggtggtgaat
ccaaatcgagaattgaatgaagagtcggtggtgattcacggcattaccgattccgaagtg
aagaatgcgccacaacttgagcaaattctagatgccattcttgatgagttagccggaaag
attgtggtggtgcactacaagagcatcgagcgtcaattcttcaaaaacgcattgttaaac
agcctgggagaggggattcaatttccagtcgttgatacgttggacatcgaatacgccatt
cagcgtcgagagtgtgaaggttggttgaacaagctcaaaggtaaaaagcctggctcggta
cgtctcggtcatgcgcgtgagcgttaccatttgccttcttatcagccacaccatgcgctg
accgatgctctcgctaccgctgagttgttacaggcgcagttgcaataccactttgacggt
gacatgccgttgtctgtgatttggcagtga
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