Vibrio campbellii ATCC BAA-1116: VIBHAR_02730
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Entry
VIBHAR_02730 CDS
T00589
Name
(GenBank) hypothetical protein
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
vha
Vibrio campbellii ATCC BAA-1116
Brite
KEGG Orthology (KO) [BR:
vha00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
vha03032
]
VIBHAR_02730
03400 DNA repair and recombination proteins [BR:
vha03400
]
VIBHAR_02730
Enzymes [BR:
vha01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
VIBHAR_02730
DNA replication proteins [BR:
vha03032
]
Prokaryotic type
DNA Topoisomerases
VIBHAR_02730
DNA repair and recombination proteins [BR:
vha03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
VIBHAR_02730
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
ApbA
DUF6674
Motif
Other DBs
NCBI-ProteinID:
ABU71688
UniProt:
A7MU78
LinkDB
All DBs
Position
I:complement(2749978..2752614)
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AA seq
878 aa
AA seq
DB search
MSDLAKEITPVNIEDELRGSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMNVLGNDWN
KPYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYMLVDGQGNFGSIDGDSAAAM
RYTEVRMAKIAHELLADLDKETVDYVPNYDGTEQIPAVLPTKIPNLLVNGASGIAVGMAT
NIPPHNLGEVIDGCLAFINNEEITIDQLMDYIPGPDFPTAALISGRKGIVDAYKTGRGKI
YMRSKAEIEVEKNGKETIIVTEIPYQVNKARLIEKIAELVKDKKVEGISALRDESDKDGM
RIVIECKRDAVGEVVLNNLYAQTQLQTTFGINMVALNNGQPQLFNLKDMLKCFVDHRREV
VTRRTIFELRKARERAHILEALSLALANIDEVIELIKNAPTPAEAKVGLVSRGWDLGNVA
SMLERAGTDAARPEWLEDQYGIRDGLYYLTETQAQAILELRLHRLTGLEHEKILDEYKAL
LDEIAELMHILASTERLMEVIREELEAVRDGYGDARRTEITAATHDIDMEELIAREDVVV
TLSHEGYVKYQILSDYEAQRRGGKGKSATKMKDEDFIERLLVANTHDNILCFSTRGKTYR
LKVYQLPHATRTARGKPIVNILPLEEGERITAILPVDEFSPEKFIFMATGDGTVKKTPLN
QFANVRSNGLIAVNLRDDDSLIGVDITNGDSDIMLFSKAGKVVRFSEDKVRAMGRTAAGV
RGMKLADEDQVVSLIVPSNEGDILTVTQNGYGKRTELAEYPTKGRATQGVVSIKVSERNG
PVVGAVQVEEGDEMMMITDAGTLVRTRVAEVSQVGRNTQGVTLIRTAEDESVVGLQRIDE
VEEVELPEGEEAEATEANAEGQAPEAPADDAAEGSEEE
NT seq
2637 nt
NT seq
+upstream
nt +downstream
nt
atgagcgatttagctaaagagatcacgcccgtaaacattgaagatgagcttagaggttca
tacctagactacgcgatgtcagtaatcgtgggtcgtgctcttccagatgtgcgtgatggc
ctaaaaccagtacaccgccgcgttttattcgcgatgaacgtactaggcaacgattggaac
aaaccatataaaaaatcagcccgtgttgtcggcgacgtaatcggtaaatatcacccacac
ggtgatagtgctgtgtacgacacaatcgtacgtatggctcagccgttctcacttcgttac
atgctggtcgatggtcaaggtaactttggctcgatcgatggcgactctgctgcggcaatg
cgttataccgaagtacgtatggcgaaaattgcccacgaacttctggctgacctagataaa
gaaaccgtggactacgtacctaactacgatggtacggagcaaatcccagcggttcttcca
actaaaattcctaacctattggtaaacggtgcttctggtatcgcggtaggtatggcaacc
aacatcccaccgcacaaccttggcgaagtgatcgatggctgtcttgcattcatcaataat
gaagaaatcacgattgatcaactaatggattacattcctggtcctgatttcccaacggca
gcgctaatcagcggtcgtaaaggcatcgtagacgcgtacaaaactggtcgcggcaagatc
tacatgcgttcaaaagcggaaatcgaagtggagaagaatggtaaagaaaccatcatcgtc
actgaaatcccttaccaggtaaacaaagctcgcttgatcgaaaagatcgctgagctagtt
aaagataagaaagtagaaggcatcagtgcgctacgtgacgagtctgataaagacggtatg
cgtatcgtaattgaatgtaagcgcgacgctgtgggtgaagtggttctaaacaacctttac
gcacaaactcagcttcaaacgactttcggtatcaacatggttgcgctaaacaacggccag
ccacagttattcaacctaaaagacatgttgaagtgcttcgttgaccaccgtcgtgaagtt
gtcactcgtcgtactatcttcgaactacgcaaagcgcgtgaacgtgctcatatccttgaa
gcactttctcttgctcttgcaaacatcgatgaagttattgagctaatcaaaaacgcacca
acaccagcagaagcaaaagttggcttggtatcgcgtggttgggatcttggtaacgtagca
tcaatgcttgagcgtgctggtactgatgcagcgcgtccggaatggctagaagatcaatac
ggtatccgtgatggtctgtactacctaactgagactcaagcgcaagctattctagaactt
cgtctacaccgtctaaccggtctagagcacgagaagattcttgatgaatacaaagcactt
ctagatgaaatcgcagagctaatgcacatccttgcaagcactgagcgtctaatggaagtg
atccgcgaagagcttgaagcagttcgcgatggttacggcgatgctcgtcgtaccgaaatc
acagcagctacccatgacatcgacatggaagagctgattgctcgtgaagacgtagtagta
actctgtctcacgaaggttacgttaagtaccaaattctaagcgactacgaagctcagcgt
cgtggtggtaaaggtaagagtgcaacgaagatgaaagatgaagacttcatcgaacgtcta
cttgttgcaaatactcacgataacattctgtgtttctctactcgtggtaagacttaccgt
ctgaaagtttaccaattgcctcatgcaactcgtactgcacgtggtaagccaatcgtaaac
atccttcctctagaggaaggtgagcgtatcactgcaattcttcctgttgatgagttctca
ccagagaaatttatcttcatggcgacaggcgatggtacggttaagaagaccccactgaac
cagtttgcaaacgtacgttcaaacggcctaatcgctgtgaacctacgtgatgatgactca
ctaattggcgttgatatcacaaacggcgatagcgacatcatgctgttctctaaagcaggt
aaagtggttcgcttcagcgaagacaaagtacgtgcaatgggtcgtacagcggcaggtgtt
cgcggtatgaaactagcagacgaagaccaagttgtttctctaatcgttccgtctaacgaa
ggcgatatcctaacggttacacaaaacggctacggtaagcgtactgaactagcggaatac
ccaacgaaaggtcgtgcaactcagggcgttgtgtctatcaaggtttctgagcgtaacggt
ccagttgttggcgcggtacaagtagaagaaggcgacgagatgatgatgatcaccgacgct
ggtactttagttcgtacacgtgttgcggaagttagccaagttggtcgtaacacccaaggt
gtgacacttatccgtacagctgaagacgaatcagtagttggcctacaacgcatcgacgaa
gttgaagaagttgaattgccagaaggcgaagaagcagaagcaacagaggcgaacgcagaa
ggtcaagctcctgaagcgccagcagacgacgcagctgaaggttcagaagaagagtaa
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