Vibrio campbellii ATCC BAA-1116: VIBHAR_02917
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Entry
VIBHAR_02917 CDS
T00589
Name
(GenBank) hypothetical protein
KO
K06179
23S rRNA pseudouridine955/2504/2580 synthase [EC:
5.4.99.24
]
Organism
vha
Vibrio campbellii ATCC BAA-1116
Brite
KEGG Orthology (KO) [BR:
vha00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
vha03009
]
VIBHAR_02917
Enzymes [BR:
vha01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.24 23S rRNA pseudouridine955/2504/2580 synthase
VIBHAR_02917
Ribosome biogenesis [BR:
vha03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
VIBHAR_02917
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
DUF3603
Cupin_2
Cupin_3
Orexin
Motif
Other DBs
NCBI-ProteinID:
ABU71870
UniProt:
A7MVF1
LinkDB
All DBs
Position
I:complement(2935256..2936275)
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AA seq
339 aa
AA seq
DB search
MNGDKCFFCRKNNVKSYRFGFTIPPMSEIRTKVQFVDIDEDMAGQRIDNFLRNQLKDIPK
SMIYRIVRKGEVRVNKKRIKAEYKLKAGDLVRIPPVTVEKKEDDVAPSTKLNKVAELEHM
IIFEDDHMLVLNKPSGTAVHGGSGLKFGAIEALRALRPQARFLELVHRIDRDTSGILLVA
KKRSALRHLQAQFREKTVKKFYFALVMGEWKNSCKVVNAPLLKNEVNSIVRVNPNGKPSE
TRFKVLERFEQATLIQASPITGRTHQIRVHTQYTGHPIAWDDRYGDRRFDAYTGQVGLDR
LFLHAANIKFQHPSNDEWMEINAPMEAKLEKVLVGLRKK
NT seq
1020 nt
NT seq
+upstream
nt +downstream
nt
atgaacggcgacaagtgtttcttttgccgcaagaataatgtgaagtcgtacagatttggg
tttacaataccgcccatgagcgaaataagaacaaaagtccagttcgttgatatcgacgaa
gacatggcgggtcaacgcattgataactttctgcgtaaccaattaaaagacattcccaaa
agcatgatttaccgaatcgtgcgtaagggtgaagtgcgcgttaataaaaaacgtattaaa
gccgagtacaaacttaaggcaggcgatctcgtacgtatccctccggtaacggtcgagaag
aaagaagacgatgtcgcaccgagtactaagttaaataaagtggcagaactagaacatatg
atcatttttgaagatgaccatatgttggtgctaaataaaccatctggtacagcagtacat
ggtggcagtggtttgaagtttggcgcgattgaggcacttcgagcattacgcccacaggca
cgctttttagaactggttcatcgtattgaccgtgacacttccggcattttgttagttgct
aagaagcgttcggcattgcgtcacctgcaagcacagttccgtgaaaagacagtgaagaag
ttctacttcgcgcttgtcatgggtgagtggaaaaacagctgcaaagtcgttaatgcgccg
ctactcaaaaatgaagtcaacagtatcgtacgtgtgaacccaaatggtaaaccgtcagaa
acgcgcttcaaggttttggaaaggtttgagcaggcgacgttgattcaagcaagtccgatt
accggccgtactcaccagattcgtgtgcatactcaatacacaggtcatccaatcgcatgg
gatgatcgttacggtgaccgccgctttgatgcttatactggccaagttggtttggaccgt
ttgttccttcatgcggcgaacatcaagttccagcacccatcgaatgatgagtggatggag
atcaacgcgccgatggaagctaagcttgaaaaagtgttggtaggtctacgtaagaagtag
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