Vibrio campbellii ATCC BAA-1116: VIBHAR_02927
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Entry
VIBHAR_02927 CDS
T00589
Name
(GenBank) hypothetical protein
KO
K01874
methionyl-tRNA synthetase [EC:
6.1.1.10
]
Organism
vha
Vibrio campbellii ATCC BAA-1116
Pathway
vha00450
Selenocompound metabolism
vha00970
Aminoacyl-tRNA biosynthesis
vha01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
vha00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
VIBHAR_02927
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
VIBHAR_02927
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
vha01007
]
VIBHAR_02927
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
vha03016
]
VIBHAR_02927
Enzymes [BR:
vha01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.10 methionine---tRNA ligase
VIBHAR_02927
Amino acid related enzymes [BR:
vha01007
]
Aminoacyl-tRNA synthetase
Class I (U)
VIBHAR_02927
Transfer RNA biogenesis [BR:
vha03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
VIBHAR_02927
Prokaryotic type
Other AARSs
VIBHAR_02927
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1g
tRNA_bind
Anticodon_3
tRNA-synt_1e
tRNA-synt_1
tRNA-synt_1f
Anticodon_1
Zn_Ribbon_YjdM
Motif
Other DBs
NCBI-ProteinID:
ABU71880
UniProt:
A7MZT3
LinkDB
All DBs
Position
I:2949110..2951095
Genome browser
AA seq
661 aa
AA seq
DB search
MLEHIQADIWVRYQRLRGNTVNFICADDAHGTPIMLKAQQMGITPEEMIAAVSEEHQKDF
AGFDISFDNYHSTHSEENRELASHIYLELKKNGFISSRTISQLFDPEKEMFLPDRFVKGT
CPKCKSEDQYGDNCDNCGETYSPTELIDPKSAVSGATPVMKDSEHFFFDLPQFESMLKEW
TRSGSLQSETANKMQEWFESGLQQWDISRDAPYFGFEIPGEENKFFYVWLDAPVGYMASF
KNLCDKTEGLDFDEYWKKDSSTELYHFIGKDIVYFHSLFWPAMLEGSGFRKPNNVFVHGY
VTVNGAKMSKSKGTFVKASTYLKHLDPECLRYYYAAKLNSRIDDLDLNLEDFTQRVNADV
VNKIVNLASRNAGFISKRFEGKLAENFAEPELYNEFVAAADRIAELYETREFGRAIREIT
ALADKANQYVDEKAPWVVAKEEGKDQELQEICSVGINLFRVLMTYLKPVMPALAARTEAF
LNQELTWEGIAAPLTGHEITKFKALFNRIDPKNIEAMIEASKEDAAAEMAAKEKAEAEKN
KASQTELDKDPIAEEIEFDAFAAVDMRIARIISCEEVPKANKLLKFQLDIGGETRQVFSG
IKSAYKPEELEGKLTVMVANLKPRKMKFGMSEGMILAAGPGGSDLWILEPHEGAQPGMRV
M
NT seq
1986 nt
NT seq
+upstream
nt +downstream
nt
atgcttgagcacattcaagctgacatctgggttcgctaccaacgcctacgtggcaacact
gtaaacttcatctgtgctgacgatgctcacggcacgccaatcatgctaaaagcacaacag
atgggtattacgccagaagagatgatcgctgcagtaagcgaagagcatcaaaaagacttc
gctggctttgatattagctttgataactaccacagcacacactcagaagagaaccgtgag
ctagcttctcacatctatcttgagctgaagaaaaacggttttatctctagccgcactatc
tctcagttgttcgatcctgagaaagaaatgttcctaccggatcgtttcgtaaaaggtact
tgtcctaagtgtaagtcagaagaccaatacggtgacaactgtgataactgtggtgagacg
tacagcccaactgagctgatcgatccaaaatcagcagtttctggcgccactccagtcatg
aaagactctgagcacttcttcttcgacctaccccagttcgaaagcatgctaaaagagtgg
actcgttcaggctctctacaatctgaaacggctaacaaaatgcaagagtggttcgaatca
ggcctgcaacagtgggatatctcacgtgatgcgccttacttcggcttcgagatcccgggc
gaggaaaacaagttcttctacgtatggctagacgcgcctgttggttacatggcttctttc
aagaacctatgtgacaaaactgaaggtctagacttcgacgagtactggaagaaagacagc
tcgactgagctataccacttcatcggtaaagacatcgtttacttccactcgctattctgg
ccagcaatgctagaaggcagcggtttccgtaagccaaacaacgtattcgtacacggctac
gtaacggtaaacggcgcgaagatgtctaagtctaaaggtacgtttgttaaagcaagcacg
tacctaaaacacctagacccagagtgtctgcgttactactacgcggcaaaactaaacagc
cgtattgacgacctagaccttaaccttgaagacttcactcaacgtgttaacgctgacgta
gtaaacaagattgttaacctagcttctcgtaacgctggcttcatctctaaacgttttgaa
ggcaagcttgctgaaaactttgcagagcctgagctatacaacgaattcgttgcagcagca
gaccgtatcgcagagctttacgagactcgtgagtttggccgtgcgatccgtgagatcacg
gcgctagcagataaagctaaccaatacgttgatgaaaaagcaccttgggttgtagcaaaa
gaagaaggtaaagatcaggaactacaagaaatttgttctgtaggtattaacctgttccgc
gttctgatgacttacctgaaaccagtgatgcctgcactagcagcgcgtactgaagcattc
ctaaaccaagagctaacttgggaaggcattgctgcaccactaactggtcacgagatcact
aagttcaaagcgctgttcaaccgtatcgatcctaagaacatcgaagcgatgatcgaagca
tcaaaagaagatgcagcagccgaaatggcagcaaaagaaaaagcagaagctgaaaagaac
aaagctagtcaaactgagctagataaagatccaatcgctgaagagattgagttcgatgct
ttcgcagcggttgatatgcgtattgctcgcatcatctcttgtgaagaagtgccaaaagca
aacaaactgcttaagttccaactagacatcggcggtgaaactcgtcaggtgttctctggc
attaagtcagcgtacaaacctgaagagctagaaggcaaactaaccgtaatggtagcgaac
ctaaaacctcgtaagatgaagtttggtatgtctgaaggcatgatcctagcagcaggccct
ggcggcagtgacctatggatcctagagccacacgaaggtgctcaaccaggtatgcgtgta
atgtaa
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