Vibrio campbellii ATCC BAA-1116: VIBHAR_03092
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Entry
VIBHAR_03092 CDS
T00589
Name
(GenBank) hypothetical protein
KO
K10918
LysR family transcriptional regulator, transcriptional activator AphB
Organism
vha
Vibrio campbellii ATCC BAA-1116
Pathway
vha05111
Biofilm formation - Vibrio cholerae
Brite
KEGG Orthology (KO) [BR:
vha00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
05111 Biofilm formation - Vibrio cholerae
VIBHAR_03092
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vha03000
]
VIBHAR_03092
Transcription factors [BR:
vha03000
]
Prokaryotic type
Helix-turn-helix
LysR family
VIBHAR_03092
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
HTH_30
Motif
Other DBs
NCBI-ProteinID:
ABU72041
UniProt:
A7MUD5
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All DBs
Position
I:3115507..3116382
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AA seq
291 aa
AA seq
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MKLDDLNLFRLVVENGSYTATSRKTMIPVATITRRIQALEDSVNLRLLNRHARKLSLTEA
GERFYHECSPLLQRLTSTAEEITDDCRGASGKIKISAPYNLTKRMMMPMFNAFMKQYPDI
NIELTTESNADQLDPTEWDVIFRVGPQRDSSLIARKIGEVKDILVASPDYLNANPAPNHA
EELSNHSLLKGSPLIKWTLINSKGESVVNVERGRFQANALNVVRSSCSEGLGITLMPDVM
IKEYIESGDLVRILPDWSANPRDIYMLYNHKDHLPEKVRLFIDFVIAYNIH
NT seq
876 nt
NT seq
+upstream
nt +downstream
nt
atgaaattagatgatctaaacctatttcgattggttgtcgaaaatgggagctataccgca
acttcgcgaaaaaccatgattccggtggcaaccatcacccgacgcattcaagcgctagaa
gactctgtcaatcttcgattgctgaaccgtcatgcgcgtaagctttctctgactgaagcc
ggggaacgcttttaccatgaatgctcaccactgttgcaacgcctaacctcaaccgctgaa
gagattacggatgactgtcgtggggcatcgggcaagataaaaatctctgccccgtacaac
ctgacaaagcgcatgatgatgccaatgttcaatgcgttcatgaaacagtacccagatatc
aacatcgaactgacaacggaaagcaatgccgatcaacttgatcctactgagtgggatgtg
atcttccgtgttggtccacaacgtgattcaagcttgattgcacgtaaaatcggtgaagtg
aaagacatcctggttgctagtcctgattacttgaacgcaaacccagcgccaaatcatgct
gaagagctttctaaccactctttgctaaaaggctcaccacttatcaagtggaccctgatc
aacagcaagggcgagtctgtggtgaacgtagaacgcggccgtttccaagctaacgcactg
aacgtagtacgtagctcttgttcagaaggtttaggtattactttgatgcctgacgtgatg
atcaaagagtacatcgaaagtggtgacctagtgcgtatactgcctgattggagcgcaaac
ccgcgcgacatttacatgctgtacaaccacaaagatcacttaccagagaaagtgcgcttg
ttcatcgactttgtgattgcttacaacattcactaa
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