Vibrio campbellii ATCC BAA-1116: VIBHAR_03210
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Entry
VIBHAR_03210 CDS
T00589
Name
(GenBank) hypothetical protein
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
vha
Vibrio campbellii ATCC BAA-1116
Pathway
vha03030
DNA replication
vha03430
Mismatch repair
vha03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
vha00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
VIBHAR_03210
03430 Mismatch repair
VIBHAR_03210
03440 Homologous recombination
VIBHAR_03210
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
vha03032
]
VIBHAR_03210
03400 DNA repair and recombination proteins [BR:
vha03400
]
VIBHAR_03210
Enzymes [BR:
vha01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
VIBHAR_03210
DNA replication proteins [BR:
vha03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
VIBHAR_03210
DNA repair and recombination proteins [BR:
vha03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
VIBHAR_03210
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
DNA_pol_A_exo1
Motif
Other DBs
NCBI-ProteinID:
ABU72159
UniProt:
A7MY20
LinkDB
All DBs
Position
I:complement(3235888..3236604)
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AA seq
238 aa
AA seq
DB search
MNTSSNSEHNRIVVLDTETTGMNLEGGPHYMGHRIIEIGAVEIINRKLTGRHFHVYLKPD
REIQPDAIGVHGITDEFLVDKPEYSAVHQEFLDFIKGAELVAHNAPFDTGFMDYEFEMLN
PSIGKTDDYCKVTDTLAMAKKIFPGKRNNLDVLCERYGIDNSHRTLHGALLDAEILADVY
LLMTGGQTSLEFNANKKDGEAEGIRRVEGRKALKVLRATADEVEAHQKRLELVNDSIW
NT seq
717 nt
NT seq
+upstream
nt +downstream
nt
atgaataccagcagcaattctgaacataatcgtattgtcgttctcgataccgaaaccacg
ggtatgaacctagaaggcggcccgcactacatgggtcaccgcatcatcgaaattggtgcc
gtggagatcatcaaccgtaagctgactggtcgtcactttcacgtttacctaaagcctgac
cgtgaaatccaacctgacgcgattggagtccacggtattacggatgaattcttggtcgat
aagccagaatactctgccgtacaccaagagtttctagacttcatcaaaggcgccgagctg
gttgcccataacgcgcccttcgataccggcttcatggattacgagtttgaaatgctcaat
ccaagcatcggtaagacggatgattactgtaaggtgaccgatactcttgccatggcgaag
aaaatcttcccgggcaagcgaaacaacctcgacgtattgtgtgaacgctacggcattgat
aactcacaccgtactctccacggggcattgctcgatgcggagattctagccgacgtttac
cttctaatgacgggtggtcaaacaagcctagaatttaatgccaataaaaaagacggcgaa
gccgaaggcattcgtcgtgttgaaggaagaaaagcgctaaaggttttgcgtgcaactgcc
gatgaagtagaagcacaccagaaaagactcgaactggtgaacgacagtatttggtag
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