Vibrio campbellii ATCC BAA-1116: VIBHAR_03224
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Entry
VIBHAR_03224 CDS
T00589
Name
(GenBank) hypothetical protein
KO
K00748
lipid-A-disaccharide synthase [EC:
2.4.1.182
]
Organism
vha
Vibrio campbellii ATCC BAA-1116
Pathway
vha00540
Lipopolysaccharide biosynthesis
vha01100
Metabolic pathways
Module
vha_M00060
KDO2-lipid A biosynthesis, Raetz pathway, LpxL-LpxM type
Brite
KEGG Orthology (KO) [BR:
vha00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
VIBHAR_03224
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
vha01005
]
VIBHAR_03224
Enzymes [BR:
vha01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.182 lipid-A-disaccharide synthase
VIBHAR_03224
Lipopolysaccharide biosynthesis proteins [BR:
vha01005
]
Lipid A
VIBHAR_03224
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LpxB
Glyco_trans_1_4
Epimerase_2
Motif
Other DBs
NCBI-ProteinID:
ABU72173
UniProt:
A7MY02
LinkDB
All DBs
Position
I:complement(3249810..3250949)
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AA seq
379 aa
AA seq
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MERPLRIGIIAGELSGDTLGEGFIKAVKQQYPDAEFVGIGGPKMIAQGCESLFDMEELAV
MGLVEVLGRLPRLLKVKAQLVKYFTENPPDVFIGIDAPDFNLRVELDLKNAGIKTVHYVS
PSVWAWRQKRIFKIEAATNLVLAFLPFEKAFYDKFNVPCEFIGHTLADAIPLQSDKASAR
EILGLEQDKQWLSVLPGSRGSELKMLSQPFIETCKKLHQKFPDIGFVVALVNQKRREQFE
QAWKEHAPELDFKLVDDTARNVITASDAVMLASGTVALECMLLKRPMVVGYRVNAVTAFL
AKRLLKTKYVSLPNILADTELVKEYLQDDCTPDNLFDEVSRLLESDNREMLDKFTEMHHW
IRKDADQQAANAVLKLIEK
NT seq
1140 nt
NT seq
+upstream
nt +downstream
nt
atggaaagaccattacgtatcggcatcattgccggagaactgtctggcgacacgctaggt
gaaggctttatcaaagcggtaaaacagcaatacccagacgcagagtttgttggtattggt
ggccctaaaatgatcgcgcaaggctgcgagtctctgttcgacatggaagagctcgccgta
atgggtctagtggaagtgctcggtcgcttgccaagacttctgaaagtcaaagcgcaactt
gtgaagtatttcaccgagaatccaccagatgttttcatcggaattgacgctccagatttt
aacttacgagttgagctagatctgaaaaatgctggcatcaaaactgtgcattacgtaagc
ccgtccgtttgggcatggcgtcaaaagcgcatctttaaaattgaagcagcgactaaccta
gtactggcattcttaccgtttgaaaaagcgttctacgataaattcaacgtgccttgtgaa
ttcattggtcacacattggctgatgccattccgctgcaatcagacaaagcgtctgcacgt
gagatactcggtttagagcaagataagcaatggttatcggtacttccgggtagccgtggc
agtgagttgaaaatgctctctcagccatttatcgaaacgtgtaagaaattgcaccagaaa
ttccccgatattggcttcgtcgttgcgctagtaaaccagaaacgtcgcgaacaattcgag
caagcgtggaaagagcatgcacctgagcttgatttcaaactggtggacgatactgcacgc
aacgtgattaccgcttcagatgccgtgatgttggcgtctggcaccgtagcgttagagtgt
atgttgctcaaacgcccaatggtggtcggttaccgtgtcaacgcggtgacggctttcctt
gctaagcgcctgctgaaaacgaaatatgtttcgctgccaaacattctggctgataccgag
ctggttaaagaatatctgcaagatgattgcacgccagacaatttattcgacgaagtgtct
cgcttactagagagcgataaccgagaaatgttggataagttcactgaaatgcatcattgg
attcgcaaagatgcggatcaacaagccgcaaacgcggttctaaaactgattgaaaaatag
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