Vibrio campbellii ATCC BAA-1116: VIBHAR_03370
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Entry
VIBHAR_03370 CDS
T00589
Name
(GenBank) hypothetical protein
KO
K04485
DNA repair protein RadA/Sms
Organism
vha
Vibrio campbellii ATCC BAA-1116
Brite
KEGG Orthology (KO) [BR:
vha00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vha03400
]
VIBHAR_03370
DNA repair and recombination proteins [BR:
vha03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
VIBHAR_03370
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATPase
AAA_25
Zn_ribbon_LapB
ChlI
DnaB_C
Lon_C
DUF7125
GvpD_P-loop
Rad51
SLFN-g3_helicase
AAA
AAA_22
ABC_tran
AAA_16
RecA_N
AAA_14
NTPase_1
nSTAND_NTPase5
AAA_29
AAA_24
Zeta_toxin
Viral_helicase1
nSTAND3
AAA_5
Zn_ribbon_8
Zn_ribbon_Thio2
zinc_ribbon_6
Motif
Other DBs
NCBI-ProteinID:
ABU72317
UniProt:
A7MUX5
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All DBs
Position
I:complement(3404365..3405744)
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AA seq
459 aa
AA seq
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MAKAKRAYVCNDCGADFPRWQGQCNACGAWNTITEVRIAASPTVARNERLSGYAGSATES
KVQTLSEIDLQEVPRFTSGFKELDRVLGGGVVPGAAILIGGNPGAGKSTLLLQTMCLLSS
QMPTLYVTGEESLQQVAMRAARLGLPKEHLKMLSETNVDKICQIAEKEQPRIMVIDSIQV
MHVSDVQSSPGSVAQVRESATALTRYAKQNNVAVFIVGHVTKDGTLAGPKVLEHIIDCSV
LLDGGTDSRFRTLRSHKNRFGAVNELGVFAMTGQGLKEVNNPSAIFLSRGEEETSGSSVM
VVWEGTRPLLVEIQALVDYSQLANPRRVAVGLEQNRLSLLLAVLHKHGGLQMADQDVFVN
VVGGVKVTETSADLALVMALLSSFRDRPLPKDVVVFGEVGLAGEIRPVPSGQERLNEAFK
HGFKKAIVPAANMPKGGIPGMQIHGVKKLSEAIEAFDEL
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atggcgaaagcaaaacgagcgtatgtttgtaatgattgtggcgcggatttcccacgttgg
caggggcagtgtaatgcgtgtggtgcatggaacacgattactgaagttcgtattgctgca
tcgccaacggtagcacgcaacgaacgcttatctggttacgcaggctcagcaacggaatca
aaagttcaaactctgtcggagattgatctgcaagaagtgccccgttttacgagtggtttt
aaagagctagaccgagtgcttggtggtggtgtggttccgggcgctgctattcttatcggt
ggtaaccccggcgcaggtaagtcgactttgcttttgcaaaccatgtgtctgttgtcttcg
caaatgcctactctctatgtgacgggtgaagaatcgctccagcaagtggcaatgcgtgcc
gcacgacttgggttgccaaaagagcacctgaagatgttgtcggaaacgaacgtcgacaag
atttgccaaattgcagagaaagaacagccgcgcattatggtgattgactcgattcaggta
atgcacgtgtctgacgttcagtcctcgccaggtagtgtcgcgcaggtacgtgaatcggca
accgcgctgacgcgttatgcaaagcaaaataatgtggctgtctttattgttggtcacgta
acaaaagatggtacccttgccggccctaaagtacttgaacacattattgactgttcagtt
ctactcgatggtggcactgatagtcgcttccgaaccttacgtagccacaaaaaccgtttt
ggtgcggtgaatgaacttggcgtctttgccatgacggggcagggactgaaagaggtcaat
aacccttcggcgattttcctttcccgcggtgaagaagagacgtcgggttcgtccgttatg
gtggtgtgggaaggtacgcgccctctattagtagagattcaagcactggtggactactca
caattggcaaacccacgtcgcgtcgcggtgggcctagaacaaaaccgtctgtctttatta
ttggcggtgctgcataagcacggtggcctacaaatggccgatcaagatgtgtttgtgaat
gtcgttggtggtgtaaaagtcacagagaccagtgctgaccttgcgctagttatggcgctt
ttgtcgagttttcgcgatcgtccactaccaaaagatgtggtggtgtttggtgaggttggc
ctagcgggagagattcgcccagtgccgagtggccaagagcgtttgaatgaagcattcaag
cacggctttaagaaagcgatcgtaccagcagcgaatatgccaaagggcggtattcctggt
atgcaaatccatggcgttaaaaaactgtcggaggctatcgaagcatttgatgagttgtaa
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