Vibrio campbellii ATCC BAA-1116: VIBHAR_03397
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Entry
VIBHAR_03397 CDS
T00589
Name
(GenBank) hypothetical protein
KO
K02600
transcription termination/antitermination protein NusA
Organism
vha
Vibrio campbellii ATCC BAA-1116
Brite
KEGG Orthology (KO) [BR:
vha00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
vha03021
]
VIBHAR_03397
03009 Ribosome biogenesis [BR:
vha03009
]
VIBHAR_03397
Transcription machinery [BR:
vha03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
VIBHAR_03397
Ribosome biogenesis [BR:
vha03009
]
Prokaryotic type
rRNA transcription factors
VIBHAR_03397
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NusA_N
KH_5
HHH_5
KH_NusA_C
S1
KH_KhpA-B
DUF2187
KH_2
S1_RRP5
Motif
Other DBs
NCBI-ProteinID:
ABU72344
UniProt:
A7MZI6
LinkDB
All DBs
Position
I:complement(3436413..3437900)
Genome browser
AA seq
495 aa
AA seq
DB search
MSKEILAVAEAVSNEKAVPRERIFEALEIALATSTKKKYEIEIDVRVAIDRKTGEFETFR
RWLVVEDVENPTKEISLEAAQYEDADIQLGDFVEDDIPSVTFDRITTQTAKQVIVQKVRE
AERAQIVEQFIDNEGDLITGVVKKVNRETVVLDLGNNAEAVILRDDQLPRENFRPGDRVR
GLLYKVAPEARGFQLFITRSKPEMLAELFRVEVPEIAEEIIELKGAARDPGSRAKIAVKT
NDKRIDPVGACVGMRGARVQAVSGELGGERIDIVLWDDNPAQFVINAMAPADVASIIVDE
DAHSMDIAVEADNLAQAIGRNGQNVRLASQLTGWELNVMTVADLQKKHAEESQASIENFM
KYLDIEEDFAQLLVEEGFSTLEEIAYVPVNELLDVDGLNEELVEELRSRAKDALTTIALA
QEESFEGLEPAEDLLGLEGLEREMAFKLAAKGVATLEDLADQGIDDLEGIEGLTEERAGE
LIMAARNICWFGEEA
NT seq
1488 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaagaaattttagcggtagcagaagcggtatcgaacgaaaaagcggtacctcgt
gagcgtatctttgaggctcttgagattgctctagcaacttctacaaagaaaaagtacgaa
atcgaaatcgatgtacgcgtagctatcgaccgtaaaacgggtgagtttgaaacattccgc
cgttggttggttgtagaagatgttgaaaacccaacaaaagaaatctctctagaagctgca
caatacgaagatgcagacattcaactaggtgatttcgtagaagacgatatcccatcggtt
acattcgaccgtattacgacgcaaactgctaagcaagttatcgtacaaaaagtacgtgaa
gctgagcgtgcgcaaatcgtagaacagttcatcgacaacgaaggtgatttgatcactggt
gttgttaagaaagtaaaccgcgagacggttgtacttgatcttggtaacaacgcagaagcg
gtaatcctacgtgatgaccaacttcctcgtgaaaacttccgtccaggtgaccgtgttcgt
ggtcttctgtacaaagttgctcctgaagcgcgtggtttccaactgttcatcactcgttct
aagccagaaatgctggctgaactgttccgtgtagaagtgccagagatcgctgaagaaatc
atcgaacttaaaggcgctgcacgtgatccaggttctcgcgctaagatcgctgttaaaaca
aacgacaagcgtatcgaccctgtaggtgcgtgtgttggtatgcgtggtgcacgtgtacaa
gcagtatctggtgagcttggtggtgagcgtatcgatatcgttctttgggacgataaccca
gctcaattcgttatcaacgcaatggcaccagctgatgttgcttctatcatcgttgatgaa
gatgcacactcaatggacatcgctgttgaagctgacaacctagcgcaagctatcggtcgt
aacggtcaaaacgtacgtctagcatctcaactaactggttgggaactgaacgtaatgact
gtggcagatcttcagaagaaacacgctgaagagtctcaagcgtctatcgaaaacttcatg
aagtacctagacattgaagaagacttcgctcaactgcttgttgaagaaggtttctcaacg
ctagaagaaatcgcatacgttccagttaatgaactgctagacgtagacggcctaaacgaa
gagcttgtagaagaacttcgtagccgtgcgaaagacgcactaacgacaattgctctagcg
caagaagagtcttttgaaggtctagagcctgctgaagacctactaggccttgaaggtcta
gagcgtgagatggcattcaagttggcagcaaaaggtgtagcaacactagaagatctagcc
gaccaaggtatcgacgatttagaaggtattgaaggcctgacagaagaacgcgcaggtgag
cttatcatggctgcacgtaacatctgttggttcggcgaagaagcataa
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