Vibrio campbellii ATCC BAA-1116: VIBHAR_03493
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Entry
VIBHAR_03493 CDS
T00589
Name
(GenBank) hypothetical protein
KO
K20918
LuxR family transcriptional regulator, positive regulator of biofilm formation
Organism
vha
Vibrio campbellii ATCC BAA-1116
Pathway
vha05111
Biofilm formation - Vibrio cholerae
Brite
KEGG Orthology (KO) [BR:
vha00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
05111 Biofilm formation - Vibrio cholerae
VIBHAR_03493
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vha03000
]
VIBHAR_03493
Transcription factors [BR:
vha03000
]
Prokaryotic type
Helix-turn-helix
LuxR family
VIBHAR_03493
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GerE
Sigma70_r4_2
VpsT-like_REC
HTH_24
Sigma70_r4
HTH_40
HTH_23
HTH_11
Trans_reg_C
HTH_AsnC-type
HTH_7
HTH_38
HTH_VMAP-M9
Motif
Other DBs
NCBI-ProteinID:
ABU72438
UniProt:
A7MYU7
LinkDB
All DBs
Position
I:complement(3549146..3549787)
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AA seq
213 aa
AA seq
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MGTKHLLLLAENNLQTSLIEGQLSIAPDVKVRTCLPEEAVFRIHTMSIDLVLIDYDFMRR
LESRGLLPDFDLFGWPLMIHNVPSESVENELLRWKLLKGILLQSASVSHISESVEYIFQG
GLWLPRVYLETLINNYRHSNVSMECQHDSLTSRERQILELLAYGISNQQIASQLFLSEST
VKSHIYKLYKKLDVHCRHDAIKIVRMNGGLTAQ
NT seq
642 nt
NT seq
+upstream
nt +downstream
nt
atgggaaccaagcatcttctccttctagcagagaataatcttcaaaccagtttaatagag
gggcaattatcaatcgcacctgatgtaaaagtcagaacgtgtttaccagaagaggccgtc
tttcgcattcataccatgagcatcgatcttgtgcttattgactatgactttatgaggcga
cttgaatccagaggtttgctcccggattttgatttattcggttggccgctaatgattcac
aacgtaccaagcgagagcgttgaaaatgaattgttgcgatggaagctacttaaaggcatt
ttgctacaaagtgcttctgtgtcccacataagtgagagtgtggaatatatatttcaagga
ggattgtggttaccaagggtgtatttagaaacgttaatcaacaactaccgacactcgaat
gtttcgatggaatgccaacatgattcgctaaccagtcgtgagaggcaaattttagagttg
ctggcttatggaatatcaaaccagcagatcgcttcacagttgtttttgtcagagagtacg
gtgaaaagccatatctataagttgtacaagaaactggatgtacattgccgtcatgatgct
atcaagatagtgcggatgaacggggggttaaccgcacaataa
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