Vibrio campbellii ATCC BAA-1116: VIBHAR_03534
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Entry
VIBHAR_03534 CDS
T00589
Name
(GenBank) hypothetical protein
KO
K03584
DNA repair protein RecO (recombination protein O)
Organism
vha
Vibrio campbellii ATCC BAA-1116
Pathway
vha03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
vha00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
VIBHAR_03534
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vha03400
]
VIBHAR_03534
DNA repair and recombination proteins [BR:
vha03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
VIBHAR_03534
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
VIBHAR_03534
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecO_C
RecO_N
Motif
Other DBs
NCBI-ProteinID:
ABU72470
UniProt:
A7MZA6
LinkDB
All DBs
Position
I:complement(3586613..3587272)
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AA seq
219 aa
AA seq
DB search
MILDVFSEEYGRITLMAKGARSKRSNLKGALQPFTPLLLKWSGKGSMKTLRQAEPISLGL
PLFGINLYSAMYVNELVGRVLMAEVPMPALFHDYLHALTELAQSDNPEPGLRRFELALLS
SMGYGVDFLHCAGTGEPVDPEMTYRYREQKGFIASVRRDNLTFLGNELIAISERRFVTKE
QLKAAKRFTRMALKPYLGGKPLKSRELFIQTYRARSNGK
NT seq
660 nt
NT seq
+upstream
nt +downstream
nt
ttgatccttgatgtattcagcgaggagtatggtcgtatcacgctgatggcgaaaggcgcg
cgcagcaaacgctctaatcttaaaggggcattacagcccttcacgccactattgctgaaa
tggtctggcaaaggttcgatgaaaaccttacgtcaggctgagccaatcagtttgggtttg
ccgttgttcgggataaacctttactccgcaatgtacgtaaatgaattagtcgggcgcgtc
ttaatggcggaagtgccgatgcctgcgctgtttcatgattatctgcatgcactaacggaa
ttggctcagagtgataaccctgaaccgggcttgcgtcgttttgaattggccctgttgtct
tcaatgggctatggcgtcgatttcttgcattgtgccgggacgggggagcctgtcgatcct
gagatgacttaccgttatcgtgagcaaaagggattcatcgcttcagtaaggcgcgacaac
ctgacatttttaggtaatgaattgattgcgattagtgaacggcgattcgtcactaaagag
caattaaaagcggcgaaacgctttacacgtatggcattaaagccgtatcttggcggcaaa
cctttaaaaagtcgcgaattattcattcagacatatcgagcacggagtaacggaaaatga
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