Vibrio campbellii ATCC BAA-1116: VIBHAR_03676
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Entry
VIBHAR_03676 CDS
T00589
Name
(GenBank) hypothetical protein
KO
K03580
ATP-dependent helicase HepA [EC:5.6.2.-]
Organism
vha
Vibrio campbellii ATCC BAA-1116
Brite
KEGG Orthology (KO) [BR:
vha00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
vha03021
]
VIBHAR_03676
Transcription machinery [BR:
vha03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
VIBHAR_03676
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RapA_C
Tudor_1_RapA
Tudor_RapA
Helicase_C
SNF2-rel_dom
ResIII
DEAD
Cas3-like_C_2
AAA_34
RelB-like
WWE
Motif
Other DBs
NCBI-ProteinID:
ABU72590
UniProt:
A7MSB2
LinkDB
All DBs
Position
I:complement(3705083..3707992)
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AA seq
969 aa
AA seq
DB search
MTFALGQRWISDTESDLGLGTVVAMDARTVTLMFAASEENRVYARNDAPVTRVTFNVGDV
IDCQEGWSLKVEEVLEDEGLYTYFGTREDTQETAIVLREIFLSNHIRFNKPQDKLYAGQI
DRMDNFVLRYRALQNQFEQHKSPMRGLCGMRAGLIPHQLYIAHEVGRRHAPRVLLADEVG
LGKTIEAGMIIHQQVLSGRAERILIVVPETLQHQWLVEMMRRFNLHFSIFDEERCIEAFA
EAENPFDTQQYVLCSLDFLRKSRKRFEQALEGEWDLLVVDEAHHLEWSQDKPSREYQVVE
GLAERTAGVLLLTATPEQLGRESHFARLRLLDPDRFYDYDAFVEEEEQYAPVADAITSLF
SGEKLPDEAKNQITELLSEQDVEPLFRIIESDSDEEAKASARQELIDNLMDRHGTGRVLF
RNTRAAIKGFPKRNVHLMPMDIPQQYTTSMRVSGMIGGKMTPEARAVKNLYPEEIFQEFE
GEDSSWWQFDSRVNWLLEKVKEKRSDKVLVIASRASTALQLEQALREREGIRATVFHEGM
SILERDKAAAYFAQEEGGAQVLICSEIGSEGRNFQFANQLVMFDLPFNPDLLEQRIGRLD
RIGQKRDIDIHVPYLKDTSQAILARWFDEGLNAFAETCPTGRAVYDKYSDALIEMLASGD
VSNLDEVIEESAKMNKELKSQLEQGRDRLLEMHSNGGEKAQQIVEKISSTDGDTNLVTFA
LSLFDTIGLNQDDKGENALVVTPSEHMMVPSYPGLPYEGATITFDRDTALSREDMHFISW
EHPMIQGGIDLLMSEGVGTSAVSLLKNKALPVGTILLELVYAVDAQAPKRSGITRFLPKT
PIRMMMDARGNDLSPQVEFEGFNRQLSPVNRHLGSKLVTSVQKDIHSLIEAGDALVEQKV
EEVRKQAHQDMQQSLNAELERLQALKAVNPNIRDEEIESIEEQIKELTGYINQAQVQLDS
LRLIVVSHN
NT seq
2910 nt
NT seq
+upstream
nt +downstream
nt
atgacatttgctttggggcagcgctggattagcgatacggaaagcgatttaggtttaggt
accgtagtagcaatggatgctcgtactgtgacattgatgtttgcagcatcagaggaaaac
cgagtttacgcacgtaacgatgcaccagttacccgagtaacgttcaacgtcggtgatgtc
atcgattgccaagaaggttggtcattaaaagttgaagaagtactggaagatgaaggtcta
tacacctatttcggtactcgtgaagacacgcaagaaacggcgatcgtgttgcgtgaaatc
ttcctaagcaaccacattcgttttaacaagccgcaagacaagttgtacgcaggtcaaatc
gaccgcatggacaactttgtacttcgctatcgtgcgctacaaaaccaatttgagcaacac
aagagcccaatgcgtggtctgtgtggcatgcgtgcaggcttgattcctcatcagctttat
atcgcacatgaagtgggtcgtcgtcacgcgcctcgcgtattgctagcggatgaagttggt
ctgggtaaaaccatcgaagcgggcatgatcatccaccagcaagtgctgtcaggtcgtgct
gaacgtatccttatcgtggtgcccgagacactgcaacaccagtggcttgttgagatgatg
cgtcgtttcaacctgcacttctctatctttgatgaagagcgttgtattgaagcgttcgca
gaagctgaaaacccatttgatacgcagcaatatgtgctgtgttcactggatttcctacgt
aagagccgcaagcgtttcgagcaagcgctagaaggcgagtgggatctattggttgtcgat
gaagcgcaccacttagaatggagccaagacaaaccaagccgcgaataccaagtggtagaa
ggcttggcagaacgcactgcgggtgtgctactgctaacggcaacaccagagcagctaggt
cgtgagagccacttcgctcgtctacgtctgctagacccagatcgcttctacgattacgac
gcattcgttgaagaagaagagcaatacgcacctgtagcggatgctatcacgtcgctattc
tctggtgagaaactgcctgacgaagcgaaaaatcaaattacggaactgctttctgagcaa
gacgttgagccgctattccgcattatcgaaagcgacagtgatgaagaagcgaaagcgtca
gcgcgccaagaactgatcgacaacctgatggaccgtcacggtacaggtcgcgttctgttc
cgtaacacgcgtgcagcgatcaaaggtttcccgaaacgtaacgtgcatctaatgccaatg
gacattccgcagcagtacaccacgtcaatgcgtgtatcaggcatgatcggcggcaagatg
acgccagaagcacgagcggtgaagaacctttatccagaagaaatcttccaagaatttgaa
ggcgaagattcaagctggtggcagttcgactcacgtgttaactggctacttgagaaagta
aaagagaaacgcagcgacaaagtactggttattgcctctcgtgcaagtactgcgctgcaa
cttgagcaggcactgcgtgagcgtgaaggtattcgtgcaactgtattccacgaaggcatg
tcgattcttgagcgtgacaaagcggctgcttactttgcgcaagaagagggcggcgcgcag
gttcttatctgtagcgaaatcggctcagaaggtcgtaacttccagtttgctaaccagctt
gtgatgttcgatttaccgttcaacccagacttgctagagcagcgtattggtcgtctggac
cgtatcggtcagaagcgtgatatcgatatccacgtgccttacctaaaagacacgtcacaa
gcgattcttgctcgttggtttgatgaaggtctgaacgcgtttgctgaaacctgtccaaca
ggtcgcgcggtttacgataagtactctgatgctctgatcgaaatgctggcgtctggtgat
gtttcaaaccttgatgaagtgattgaagaatcagcgaagatgaacaaagagctgaaatca
caacttgagcaaggccgtgaccgtctactagagatgcattcaaacggcggcgagaaagcg
cagcagattgttgagaaaatctcatcgacagatggtgacacaaacctagtgacgttcgca
ttgtctctgttcgacaccattggcttgaaccaagacgacaaaggcgagaacgcacttgtg
gtaacgccatctgagcacatgatggtaccaagctacccaggtttgccatacgaaggcgcg
acaatcacgtttgaccgtgatactgcgctgtctcgtgaagatatgcacttcatcagttgg
gaacacccaatgattcaaggcggtatcgatctgctgatgagcgaaggtgtgggtacctct
gcggtttctctgctgaagaacaaagcactaccagtgggcactatcttacttgagttggtt
tacgcggtggatgcacaagcaccaaaacgcagtggcattactcgtttcctaccgaagacg
ccaattcgcatgatgatggatgctcgtggtaacgatctgtctcctcaggttgagtttgaa
ggcttcaaccgtcagcttagcccggtaaaccgtcacctaggcagcaagctagtgacatca
gtacagaaagacattcacagcctaatcgaagcgggtgacgcattggttgagcagaaagtg
gaagaagttcgcaagcaagcgcaccaagacatgcaacaaagcttgaatgccgagcttgag
cgtctacaagcactgaaagcggttaacccgaacatccgtgatgaagaaattgaatcgatt
gaagagcaaatcaaagagctaacaggttacatcaaccaagctcaggttcagttagattcg
ctacgtttgattgtggtcagccataactaa
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