Vibrio campbellii ATCC BAA-1116: VIBHAR_05123
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Entry
VIBHAR_05123 CDS
T00589
Name
(GenBank) hypothetical protein
KO
K19236
L,D-transpeptidase YcfS
Organism
vha
Vibrio campbellii ATCC BAA-1116
Pathway
vha01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
vha00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01503 Cationic antimicrobial peptide (CAMP) resistance
VIBHAR_05123
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
vha01002
]
VIBHAR_05123
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
vha01011
]
VIBHAR_05123
Peptidases and inhibitors [BR:
vha01002
]
Cysteine peptidases
Family C82
VIBHAR_05123
Peptidoglycan biosynthesis and degradation proteins [BR:
vha01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
VIBHAR_05123
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YkuD
Ldt_C
LysM
Motif
Other DBs
NCBI-ProteinID:
ABU73029
UniProt:
A7N2I8
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All DBs
Position
II:360664..361590
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AA seq
308 aa
AA seq
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MPSKKRPMSIAKRTLLSVSLSLVSGLSFAKMYELPEDGARVIGRMENHVVEQGETMANIA
KQYDVGMLALMAANKGVDPFLPKEGHVLTIPTQLILPDVPHKGIVINLAELRLYYFPAKE
NVVHIFPVGIGRIGRDTPEMTTSISQKRPNPTWTPPSSIRAEYKAKGIDLPAVVPAGPDN
PLGMFALRLAYGHGEYLIHGTNKDFGIGMRVSSGCIRMDPNDIEWLFDKVRRGEKVKIIN
QPVKVTLEPDRSVFVEAHEPLTRSNGEKDHLQIPKELDWWLDEYGMTNAKAKAAIAAQNG
VPVEITAP
NT seq
927 nt
NT seq
+upstream
nt +downstream
nt
atgcctagcaagaagcgtccaatgagtatcgctaaacgaaccctgttgtctgtatcgttg
tctttagtgagtggtttgtcattcgcaaagatgtatgaactaccggaagacggggctcgc
gtcataggtcgcatggaaaatcatgtggtcgaacagggcgaaaccatggcaaacattgct
aagcagtacgatgttggcatgctggcgttaatggcggccaacaaaggcgtagaccctttt
ctaccaaaagaagggcacgtactgacgattcctactcagcttatccttcctgatgtccct
cacaaaggcattgtcatcaacttggctgaattgcgtctgtactacttcccagcaaaagaa
aacgtagtacacatcttcccagtagggattggtcgtattggccgtgacacgccagaaatg
accacgagcatcagtcaaaagcgcccaaacccaacttggacaccaccttcttcgattcga
gcagagtacaaagcgaagggcattgatttgcctgcagtagtaccagcaggtccagataac
ccgttaggtatgtttgcacttcgcttggcctatggccatggtgagtacttgatccacggt
accaacaaagattttggcatcggtatgcgcgttagttcgggctgtattcgtatggatcct
aacgatatcgaatggttgttcgacaaagttcgtcgtggtgaaaaagtgaaaatcatcaat
caacctgtaaaagtgacgctagaaccggatcgcagtgtgtttgttgaagcgcatgaacca
ttgactcgcagtaatggcgagaaagatcatctacagatcccgaaagagttggactggtgg
cttgatgaatatgggatgacgaatgcgaaagcaaaagcagcgattgctgcgcagaatggt
gttccagtagaaataaccgcgccttaa
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