Vibrio campbellii ATCC BAA-1116: VIBHAR_05153
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Entry
VIBHAR_05153 CDS
T00589
Name
(GenBank) hypothetical protein
KO
K20918
LuxR family transcriptional regulator, positive regulator of biofilm formation
Organism
vha
Vibrio campbellii ATCC BAA-1116
Pathway
vha05111
Biofilm formation - Vibrio cholerae
Brite
KEGG Orthology (KO) [BR:
vha00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
05111 Biofilm formation - Vibrio cholerae
VIBHAR_05153
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vha03000
]
VIBHAR_05153
Transcription factors [BR:
vha03000
]
Prokaryotic type
Helix-turn-helix
LuxR family
VIBHAR_05153
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GerE
VpsT-like_REC
HTH_40
HTH_23
Sigma70_r4
Sigma70_r4_2
Motif
Other DBs
NCBI-ProteinID:
ABU73059
LinkDB
All DBs
Position
II:393230..393886
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AA seq
218 aa
AA seq
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MRKTMEQYKDQPEILMITQQSLQSENFKEILSKRTETKITIIDSKNPSYHELIPEQYFLL
VDFSVDIPSDTLVYLKDSEKVLGTIMLNLSHELDTEELVSWPHLKGIFGPSDSMDKLCQG
LSAIVSGDNWLSRRLLDQLLTYYKGKESNYIIEPAIEVELTRREVQVLQMLKDGGSNMEI
ADSLFISEHTIKSHLYNIFRKIEVKNRTQATSWAKRNL
NT seq
657 nt
NT seq
+upstream
nt +downstream
nt
atgagaaagactatggaacaatataaggaccagccagaaatcctaatgatcactcagcaa
agtctgcagagtgaaaacttcaaggagatactttctaagagaacagaaacaaaaataacc
atcatcgatagtaaaaatccaagttaccacgagttgattcctgaacagtatttcttacta
gtcgatttttcagtagatatcccttctgacactttagtttatctgaaagatagtgagaaa
gtacttgggaccattatgttgaatttaagtcatgagctagatactgaagaacttgtgtct
tggcctcatctaaaaggtatatttggccctagtgattcaatggataagttatgccaaggt
ttaagtgcgatcgtcagtggtgataattggctatcgcgtcgtttattggatcagcttctt
acttactataaaggtaaagagtctaactacattattgagccagcaatagaagtagagctt
acacgtagagaggttcaagttcttcagatgcttaaagatggtggttctaatatggaaata
gcggattcactatttatcagtgagcacacgataaaatcacacctatataatattttcagg
aagattgaagtcaaaaacagaacgcaagcaaccagttgggcaaaaagaaacctttag
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