Vibrio campbellii ATCC BAA-1116: VIBHAR_05385
Help
Entry
VIBHAR_05385 CDS
T00589
Name
(GenBank) hypothetical protein
KO
K01493
dCMP deaminase [EC:
3.5.4.12
]
Organism
vha
Vibrio campbellii ATCC BAA-1116
Pathway
vha00240
Pyrimidine metabolism
vha01100
Metabolic pathways
vha01232
Nucleotide metabolism
Brite
KEGG Orthology (KO) [BR:
vha00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
VIBHAR_05385
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
vha02044
]
VIBHAR_05385
Enzymes [BR:
vha01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.4 In cyclic amidines
3.5.4.12 dCMP deaminase
VIBHAR_05385
Secretion system [BR:
vha02044
]
Type II secretion system
Competence-related DNA transformation transporter (DNA-T) core components
VIBHAR_05385
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
dCMP_cyt_deam_1
MafB19-deam
Bd3614-deam
APOBEC3
HVO_2753_ZBP
Motif
Other DBs
NCBI-ProteinID:
ABU73290
UniProt:
A7N3W5
LinkDB
All DBs
Position
II:complement(611903..612409)
Genome browser
AA seq
168 aa
AA seq
DB search
MRYHADNSKLSTERMSMISKWEKRFYQMAELVASWSKDPSTQVGAVITKNNRIVSVGFNG
YPHGVSDSVDTDERELKYLKTLHAEENAILFSKRDLDGCDIWVTHFPCPNCAAKIIQTGI
ARVSCPEQSEDFLSRWGDKIKVSQDMFDQAGVEVNWLPINEIEEKSVR
NT seq
507 nt
NT seq
+upstream
nt +downstream
nt
atgcgttatcatgcagacaattcaaagctttcgaccgagaggatgagtatgatttctaaa
tgggagaaacggttctaccagatggctgaacttgttgcgtcatggagtaaagatccatcc
acacaagttggcgcggtaatcaccaaaaataaccgcattgtttctgttggcttcaacggc
tacccacacggcgtatctgacagcgttgatacagatgaacgcgaactgaaatatctaaaa
acgcttcacgcagaagagaacgccattttgttttcgaagcgtgacttagatggttgtgat
atttgggtaacccacttcccttgcccgaactgtgcagcaaaaatcattcaaacagggatt
gcacgtgtaagctgccctgaacaatctgaagatttcttatctcgctggggcgacaagatt
aaagtgagccaagacatgttcgaccaagcgggtgttgaagtaaactggctaccaatcaac
gagatcgaagagaaaagcgttcgttaa
DBGET
integrated database retrieval system
