Vibrio campbellii ATCC BAA-1116: VIBHAR_05971
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Entry
VIBHAR_05971 CDS
T00589
Name
(GenBank) hypothetical protein
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
vha
Vibrio campbellii ATCC BAA-1116
Pathway
vha00260
Glycine, serine and threonine metabolism
vha00460
Cyanoamino acid metabolism
vha00630
Glyoxylate and dicarboxylate metabolism
vha00670
One carbon pool by folate
vha00680
Methane metabolism
vha01100
Metabolic pathways
vha01110
Biosynthesis of secondary metabolites
vha01120
Microbial metabolism in diverse environments
vha01200
Carbon metabolism
vha01230
Biosynthesis of amino acids
vha01240
Biosynthesis of cofactors
vha04981
Folate transport and metabolism
Module
vha_M00140
C1-unit interconversion, prokaryotes
Brite
KEGG Orthology (KO) [BR:
vha00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
VIBHAR_05971
09102 Energy metabolism
00680 Methane metabolism
VIBHAR_05971
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
VIBHAR_05971
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
VIBHAR_05971
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
VIBHAR_05971
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
VIBHAR_05971
Enzymes [BR:
vha01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
VIBHAR_05971
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GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
DegT_DnrJ_EryC1
Motif
Other DBs
NCBI-ProteinID:
ABU73864
UniProt:
A7N5C2
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All DBs
Position
II:1159954..1161249
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AA seq
431 aa
AA seq
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MNKSYPNHSLENFFSTNLSATDDAVFAGIQAEFARQNEQIELIASENIVSKAVMQAQGTC
LTNKYAEGYPGRRYYGGCEHVDTVEAIAIERAKKLFNCEYANVQPHSGAQANGAVKLALL
QPGDTILGMSLDAGGHLTHGARPALSGKWFNAVQYGVDRETLEINYDDVRELALEHQPKM
IIAGGSAIPRTIDFAKFREIADEVNAILMVDMAHISGLIATGAHPSPLPHAHVVTTTTHK
TLRGPRGGMILTNHEDIIKKINSAVFPGLQGGPLMHVIASKAVAFGEALGPEFKTYIDSV
INNAKVMAEVLQTRGCDIVTGGTDTHLMLVDLRPKGLKGNKAEEALERAGITCNKNGIPF
DTEKPMITSGIRLGTPAGTSRGFGAEEFKLIGNWIGDVLDGLVSNPEGDAEVEKRVRKQV
KELCSRFPLYQ
NT seq
1296 nt
NT seq
+upstream
nt +downstream
nt
atgaacaagagttaccctaaccacagcttggaaaactttttctctaccaacctctctgcg
acagatgacgctgtctttgctggaattcaggcagaattcgctcgccaaaacgaacaaatc
gaacttatcgcttctgagaacatcgtttctaaagcggtaatgcaagctcaaggcacatgc
ctaacaaacaaatacgctgaaggttacccaggtcgccgttactatggtggttgtgagcac
gtagatacagtggaagccattgctatcgaacgcgcgaaaaaacttttcaattgtgaatac
gcaaacgttcaaccacactcaggcgcacaagcaaacggcgcagtaaaactggcactgctg
caacctggcgacaccattcttggtatgtctctagacgcaggtggccacctaactcacggt
gctcgccctgcactttctggtaaatggtttaacgcagtgcaatacggcgttgaccgcgaa
acgctagaaatcaactacgacgacgttcgtgagctagcacttgagcaccaacctaaaatg
atcatcgcaggtggtagtgcaattccacgtactatcgacttcgcaaaattccgtgaaatc
gcagacgaagtaaacgcgattcttatggtcgacatggcgcacatctccggtcttatcgca
acaggcgctcaccctagcccgcttcctcacgcacacgttgttactacgacaacgcacaaa
acattgcgtggcccacgtggcggtatgatcctgactaaccacgaagacatcattaagaaa
atcaactctgcggtattcccaggtttacaaggcggcccactgatgcacgtgattgcctct
aaagcagtggcattcggtgaagccctaggtcctgaattcaaaacttatatcgattcggtg
atcaacaacgcaaaagtcatggcagaagtattgcaaactcgcggttgcgacatcgtaacc
ggtggtactgacacgcacctaatgctggttgaccttcgccctaaaggtttgaaaggtaac
aaagcagaagaagcactagagcgtgcaggcatcacatgtaacaaaaatggcatcccattc
gacacagagaagcctatgattacatcgggcatccgtttaggtacgcctgcgggtacaagc
cgcggctttggcgctgaagaattcaaactcattggtaattggattggtgacgtactggat
ggtttggttagcaacccagaaggtgacgcagaagtagaaaaacgcgtacgcaagcaagtt
aaagagctttgcagtcgcttccctctttaccagtaa
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