Vibrio campbellii ATCC BAA-1116: VIBHAR_06147
Help
Entry
VIBHAR_06147 CDS
T00589
Name
(GenBank) hypothetical protein
KO
K20966
c-di-GMP phosphodiesterase [EC:
3.1.4.52
]
Organism
vha
Vibrio campbellii ATCC BAA-1116
Pathway
vha05111
Biofilm formation - Vibrio cholerae
Brite
KEGG Orthology (KO) [BR:
vha00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
05111 Biofilm formation - Vibrio cholerae
VIBHAR_06147
Enzymes [BR:
vha01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.52 cyclic-guanylate-specific phosphodiesterase
VIBHAR_06147
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EAL
GGDEF
HAMP
GGDEF_GdpP
Motif
Other DBs
NCBI-ProteinID:
ABU74040
UniProt:
A7N2S5
LinkDB
All DBs
Position
II:1325795..1328131
Genome browser
AA seq
778 aa
AA seq
DB search
MKLSNRVVLLVAPVILISALVSSYIIYSIQKVTLIKREDSYIQLQMEKLAGQFRQANIFL
NSYAYTLSKSEVLQDYFVNHDNHYRERQLFKRLDETIEVLSHGYRGDANMAILDGRQDLL
YYTENQYYESNGRVDPKILEYVDKSFKTNGDVSHTGFIYNSSGQSILLQYELFDKRTGEH
PLSFDPQNVFFVIVSVSLEAFNDIKHEIEFDTHSVITFSDKPIILDIPLAQTIQFLPHFY
AILSPAEYLMWNKVDKVWLELALSFGIASFCTITLIVLVLYRYVLSPVSRLDKQLREIEA
NKRANIEKLDTDDEIGRLSSRFFDMYEELNNVYHKTKRLAETDHLTQLANRHRFHELASQ
ELAEPSEQIWVIYIDLDNFKYVNDKYGHELGDKLLQVFSKHIRNACQKFTQQYNSPCFGA
RLSGDEFAILLSSNQENSELPDLFAAELLKPINNLTQSAKNSFPVTASVGIAQYPRDGGD
IAKLLSSADAAMYQAKRAGKNQYAYYSAALNIEAQRRSQIERALRKANVEEEFRLVFQPY
MNSNANEIEGLEVLLRWEAEGIGSVPPNEFIPIAEQTGLFEKIDRWVFANAMAEYYQLKS
IFGKDIILSINLSSAELNSLSMAEFIHEKATQNGVPTRCIELEITETFASDKQGTALLDE
LSKLGYKLAIDDFGSGYTSLTQLVQYPVQKIKFDREFLLTLMNTDNGHVIKPIIELCHAQ
NKKVTAEGIEHNVMHEWLSSYRCDFMQGYLFGKPMNKEQLGHWWKSANDQPFKSTHIA
NT seq
2337 nt
NT seq
+upstream
nt +downstream
nt
atgaaattaagcaacagagtcgttttgcttgtcgcccctgtcattctaattagcgcgctg
gtgtcgagttacatcatctatagcattcaaaaagtcacgctaatcaaaagggaagacagc
tatatccagctacaaatggaaaagctagctggtcagtttcgccaagccaatatttttctt
aacagctatgcctacaccttgagtaaaagcgaggtgctgcaagattattttgtgaatcat
gataaccactatcgtgagaggcaactattcaaacgtttagatgaaaccatcgaggtactc
agtcacgggtatcgaggggatgcaaatatggcgatcctcgacggtaggcaagacctcctc
tactacaccgaaaatcaatattacgaatcaaacggtcgagtcgaccccaagatccttgag
tatgtcgacaaaagctttaaaaccaatggagacgtaagccataccggttttatttacaac
agcagcggacagagcattctattgcaatacgagctgtttgataaacgtaccggagagcac
cctttaagcttcgacccacaaaatgttttctttgttatcgtgtctgtctcactcgaagcg
tttaatgacatcaagcatgagattgagtttgatacgcacagcgtgattacgttttcagat
aagccgattatcttagatattccccttgctcaaaccatccagtttctgcctcacttctat
gccattttatcgccagcagaatatctgatgtggaataaggtcgataaggtctggttagag
ctagcattgtcttttggtatcgcatctttttgtaccattactttaattgtcttagtcctt
taccgctatgttctgagtccagtctctaggctagacaaacagttgagagaaatcgaagcc
aacaaacgcgcaaatattgaaaagctcgatactgatgatgagattggacgcctttcttcc
cgcttctttgatatgtacgaagagctgaacaacgtctaccacaaaactaagcgtttagcg
gaaactgatcacttaactcaactggctaatcgccaccgcttccatgagcttgcaagccaa
gagctggcagaaccctcagagcagatttgggtgatttatatcgacctagataactttaaa
tacgtcaacgacaaatacggccacgaactgggtgacaagttattgcaggtcttctccaaa
cacatccgaaatgcgtgccagaagttcactcagcagtacaatagcccatgtttcggggca
cgtttatccggtgatgaatttgcaatcctactcagctcaaatcaagaaaacagcgaatta
cccgatctgtttgccgcggagttgctcaagccaattaataacttaactcagtcagcaaaa
aactcgtttccggtgacagccagcgtgggtatcgctcaatatccaagagatggtggtgat
atcgctaagctcttgtctagtgcagacgcggcaatgtaccaagctaagcgcgcgggtaaa
aaccaatacgcatactactctgcagcgctcaatatcgaggctcaacgtcgtagccaaatt
gaacgcgcattgcgcaaggccaacgttgaagaagagtttcgtcttgttttccaaccatac
atgaacagtaatgccaacgagatagaaggcttggaagtcctattacgttgggaagcagaa
gggatcggctcagtaccaccaaacgagttcatccctattgctgaacaaactggtttgttc
gaaaagattgaccgctgggtattcgcgaatgccatggcagaatactatcagctgaaaagc
atctttgggaaagacattattttgtctatcaacctatcgtctgcggaactgaactcgctg
tcgatggcagaattcatccatgaaaaagccacacagaatggtgtgcctacgcgctgtatt
gagctagaaattaccgaaactttcgcgtctgacaagcaaggtactgccctactcgatgag
ttatcgaagctgggttacaaactggcaatagacgactttggatctggttatacttctttg
acacaactagtgcagtacccagtacagaaaatcaaatttgaccgagagttcttgttgacc
ttaatgaacaccgataatggtcatgtcattaaaccaattatagagctgtgccacgcacag
aataagaaagtgacggcagaaggcattgagcataacgtcatgcacgaatggctttcatct
taccgctgtgactttatgcagggttatttatttggtaagccgatgaacaaagaacagctc
ggccattggtggaagtccgctaatgatcagccatttaaaagcacacatatcgcttag
DBGET
integrated database retrieval system
