Vibrio campbellii ATCC BAA-1116: VIBHAR_06170
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Entry
VIBHAR_06170 CDS
T00589
Name
(GenBank) hypothetical protein
KO
K13246
c-di-GMP phosphodiesterase [EC:
3.1.4.52
]
Organism
vha
Vibrio campbellii ATCC BAA-1116
Pathway
vha05111
Biofilm formation - Vibrio cholerae
Brite
KEGG Orthology (KO) [BR:
vha00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
05111 Biofilm formation - Vibrio cholerae
VIBHAR_06170
Enzymes [BR:
vha01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.52 cyclic-guanylate-specific phosphodiesterase
VIBHAR_06170
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GFIT
Motif
Pfam:
EAL
Response_reg
Motif
Other DBs
NCBI-ProteinID:
ABU74062
UniProt:
A7N2Q6
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All DBs
Position
II:1348404..1349546
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AA seq
380 aa
AA seq
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MNVLIVEDDRLQATNLKILLNRLFEGTITVVHRGSEVATVCEAQPIDVMFCDIDLPDING
VNLLSTLAESSRPKGVVILSAMTQDVLEITYNMCLSAGYGFVRALTKPISNQQLTQIFGE
FKQYLSQEQFVSLPVLMNDDEIDTAFNEGRFINYYQPQYSTSDNQLIGVEALVRCRHPEH
GIIAPAQFITEIQVRNELDKLFWIVLENALQDMSALKVDINLSVNMNQKTLKQPMSERLF
ALCEQYQIAPERITLELTEDEVYDCSVTSLANLANLRLRGVGLAIDDFGTGYSSLSQLAT
LPYTELKIDRQFIKDALTNFKSQQLTISSLHLAKSLGLKSVAEGVEDNETLAYLRELGVE
LYQGFVRCRPIPFEQLETLI
NT seq
1143 nt
NT seq
+upstream
nt +downstream
nt
atgaacgttttgattgtagaagatgatcgattacaagcaaccaatcttaagattttgctc
aatcgtctatttgaaggcacgattaccgtcgtccatcgagggtcagaagtcgcgaccgtt
tgcgaggcccaaccaatcgatgtgatgttctgcgatattgatttaccagatatcaatggg
gtgaacctactttcaacccttgcagaaagctcgcgtccaaaaggcgtggtgattttgagt
gcgatgacccaagacgtgctcgaaattacctacaacatgtgcttgtctgcgggctacggg
tttgttcgcgcattaactaaacccatttctaatcagcaactcactcagatcttcggtgag
ttcaaacaatacttatcgcaagagcaattcgtgagcttgcctgtgttaatgaatgacgac
gagattgacactgccttcaatgagggcaggtttatcaattattaccaaccacaatactca
acgtcggataaccaactgattggagtcgaagcattagtacgttgtcgtcaccccgagcac
ggcattattgcacctgcgcagtttattactgagattcaggttcgtaacgagttggataaa
ctgttctggattgtgctagagaacgcgcttcaagacatgtccgcactgaaagtagacatc
aacttatcagtcaacatgaaccaaaagacgctgaagcaacctatgagtgagcgactattt
gccttgtgcgaacaataccaaatagcacctgaacgcatcacacttgaactgaccgaagac
gaagtgtacgactgcagcgtcacgtcgctagccaacctcgccaacttacgtttaagaggc
gttggcttagccattgacgactttgggaccggttactcgtccctgagccagttagcaacg
ctgccttatacagagttaaagattgaccgccaatttatcaaagatgcattaaccaacttc
aagagccaacagctcactatttcgagcctacacctagcaaagtcattaggacttaaatcg
gtggcagaaggtgtagaagataatgaaacattggcgtatttgcgcgaacttggcgtggaa
ctttaccaaggatttgttcgctgccgccctatcccctttgaacaattggaaacgttgatc
taa
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