Vibrio campbellii ATCC BAA-1116: VIBHAR_06426
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Entry
VIBHAR_06426 CDS
T00589
Name
(GenBank) hypothetical protein
KO
K07258
serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:
3.4.16.4
]
Organism
vha
Vibrio campbellii ATCC BAA-1116
Pathway
vha00550
Peptidoglycan biosynthesis
vha01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
vha00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
VIBHAR_06426
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
vha01002
]
VIBHAR_06426
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
vha01011
]
VIBHAR_06426
Enzymes [BR:
vha01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
VIBHAR_06426
Peptidases and inhibitors [BR:
vha01002
]
Serine peptidases
Family S11: D-Ala-D-Ala carboxypeptidase A family
VIBHAR_06426
Peptidoglycan biosynthesis and degradation proteins [BR:
vha01011
]
Peptidoglycan biosynthesis and degradation
DD-Carboxypeptidase/DD-Endopeptidase (Low molecular weight PBP)
VIBHAR_06426
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_S11
PBP5_C
Beta-lactamase2
Beta-lactamase
Peptidase_S13
Motif
Other DBs
NCBI-ProteinID:
ABU74317
UniProt:
A7N3J9
LinkDB
All DBs
Position
II:complement(1586098..1587267)
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AA seq
389 aa
AA seq
DB search
MRKNTLFNATLATTLTAVSAFSFAAPTVVPNAPELSSRGYVLMDYHTGTVLVERDADKRL
NPASLTKLMTAYVAGQEVKSGNISLDDEVVISRNAWAKNFPDSSKMFIEVGTSVSLSDLY
RGLIVQSGNDASVAIAEHVAGSEAGFVGLMNSWANQLGLSNSAFTNPHGLDSDGLYSTPR
DIATLGRAIIRDLPDIYPLYSETSFTYNGITQYNRNGLLRDRSMSVDGMKTGYTSGAGYS
LATSATNGDMRLVAVVMGAKSPSVRESESKQLLSYGFRFFDTVVPTQAGKEVATARVWMG
NQDELKVGVDRDIYLTLPKGDVNKLEAEVEYNGDLMAPIQQNQVVGKVLYKVDGDVVKEA
ELVALEPVDEGGIFKRLMDWFKRLVASWF
NT seq
1170 nt
NT seq
+upstream
nt +downstream
nt
atgagaaaaaacactttattcaatgctacgttagcgaccaccttgactgctgtttctgcg
tttagttttgctgctcctaccgttgttcctaatgccccagagctgagctctcgtggctat
gttttaatggattaccacactggcactgtgctagttgaacgtgatgccgacaagcgcctc
aacccggcaagtctgactaagctaatgacggcttatgttgcgggccaagaggttaagtca
ggtaacatcagcctagacgatgaagtggtgataagccgcaacgcctgggcgaaaaacttc
ccagattcgtcaaagatgtttatcgaggtagggacgtcggtttcactttctgatctttac
cgaggtctgattgttcaatcgggtaacgatgccagtgtcgccatcgcagaacatgttgcg
ggtagtgaagctggctttgttggtttgatgaacagttgggcgaaccaacttggtttgtct
aactctgcctttaccaacccacatggtttggacagtgatggtctgtattcaaccccgcgc
gacatcgcaacgctaggccgtgcgatcattcgtgacctgccagatatctacccgttatac
agcgaaacgtcgtttacttataacggtattacccaatacaaccgtaacggcttgctacgt
gatcgcagcatgagtgttgatggcatgaagacgggttacaccagcggcgcaggttacagc
ttggcgacttctgcaaccaacggagacatgcgtttagtcgcggttgtgatgggcgcgaaa
agcccgagcgtacgtgaatcagagagtaaacagcttctgagctacggtttccgtttcttc
gatacggttgttccgacacaagcgggtaaagaagtggcaacggcacgtgtttggatgggt
aaccaagacgaattaaaagtgggtgttgaccgcgatatctacctaacactaccaaaaggt
gacgtgaacaagctggaagcggaagtggaatacaacggcgacctgatggcaccgattcaa
caaaatcaagtagttggtaaggtgctgtacaaagttgacggtgacgtggtaaaagaagcg
gaactggttgcgctagagcctgttgatgaaggcggtatctttaagcgtttgatggactgg
ttcaaacgtcttgtggcaagctggttctaa
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