Vibrio campbellii ATCC BAA-1116: VIBHAR_06455
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Entry
VIBHAR_06455 CDS
T00589
Name
(GenBank) hypothetical protein
KO
K12530
ATP-binding cassette, subfamily B, bacterial RtxB
Organism
vha
Vibrio campbellii ATCC BAA-1116
Pathway
vha02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
vha00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
VIBHAR_06455
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vha02000
]
VIBHAR_06455
02044 Secretion system [BR:
vha02044
]
VIBHAR_06455
Transporters [BR:
vha02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
VIBHAR_06455
Secretion system [BR:
vha02044
]
Type I secretion system
RTX toxin transporter
VIBHAR_06455
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_16
AAA_22
AAA_30
SbcC_Walker_B
AAA_18
ABC_ATPase
AAA_29
PRK
AAA_5
DUF87
Motif
Other DBs
NCBI-ProteinID:
ABU74346
UniProt:
A7N869
LinkDB
All DBs
Position
II:complement(1612360..1614504)
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AA seq
714 aa
AA seq
DB search
MVRAYPKRDALSHSAVVSSQVLLKLLGVSCQMPTEHPGGDLKGWLKKASGQTDGQLRLKR
LSENTLTASHLPLAYQQHDGEFVVLARLSDDQALIQRHHEQTPQVISRTTLEEAWAGQVI
QYHESGRQFDIRWFIPEFIRHRGLLGEILFFSLLLQMLALVLPLFFQVIMDKVLVHNALS
TLDVLVVALVVVGLFEVILKGLREYLLAHTTTRIDIRLGTKLFKHLLGLPLLYFKNRHVG
AIVTRVRELDSIRNLLTGAALTLLVDVSFTFVFLGVMVYLSAPLTALVIATLPLYALLAW
ATSEPLKRRIEHQFACGAKNTAFLTESLNGVETVKSLALEPRFERRWEGQTQELVAANFS
RQSFQAQVSQCVTLLQKVTSVGVLWLGAQMVMSLELTIGQLIAFNMMVNHVSQPLAKLVE
LWQQFIQTRVAVDNLSEMLNLPAEQEMGEFQPNAPIQGHIEFQQVWFRYQPQLAPVLHGL
SLTIKPGESIGLVGPSGSGKSTVTRLIQKLYLAEKGQVLIDGTPLNQWSAAALRQGIGVV
LQENYLFHRTVRENIAIRQPTASFEAVVEAAKLAGAHEFIIKMPKGYDTLLAEGGASLSG
GQKQRIAIARALMTQPRILIFDEATSALDEESQRIVNQNMAKIARGRTVITVAHRLSAVQ
GCDRIAVIEQGEVTELGNHQHLLAQQGCYARLWHIQQNKQVESVGEEVLPCSQS
NT seq
2145 nt
NT seq
+upstream
nt +downstream
nt
atggttagggcttacccaaaacgggatgcgctgtcgcacagtgctgtcgtaagctctcag
gttttgctcaagcttttgggcgtctcttgtcaaatgccaacagagcatccaggaggcgat
ctaaaaggctggctcaagaaagcgtcaggtcaaactgatggtcaactgagattaaaacga
ctctcagaaaacacactcacggcttcacatttgcctcttgcgtatcaacagcacgatggc
gaatttgtggtgctcgctcgattgtctgatgaccaagcgttgatccaacgtcatcacgag
caaaccccccaagtcatctcaagaaccacgcttgaagaagcctgggcaggccaagtgatc
caatatcacgaaagcgggcgtcagtttgatattcgctggtttatcccggagtttattcga
catcgtggcttactgggcgaaatcctgttcttttccctcctccttcagatgctcgcactg
gtgctcccactatttttccaagtgatcatggacaaagtgctggtgcacaatgcgctgtcg
acacttgacgtgttagttgtggcattggtggtggtcggtctcttcgaagtgatattgaaa
ggactgcgggaatatttgttggcgcacaccacgacgcgtatcgacattcggcttggcaca
aaactctttaaacacttacttgggctgcccctgctttacttcaaaaatcgccatgtgggc
gcgatcgtcactcgagttcgtgagctcgacagtattcgaaacctgctcaccggcgcggcg
ttaactttgttggtggatgtcagttttacctttgttttcctgggtgtgatggtctatttg
tctgcacctctgacggcactcgtcatcgcgaccttgccactgtatgccttgcttgcatgg
gcgacgtccgagccactcaagcgccgtatcgagcaccagttcgcttgtggggccaaaaac
accgcctttttgacggaatcgctcaatggcgtggagacagtgaaaagtctggccctagaa
ccccggtttgaacgccgctgggaaggacagactcaagaactggttgcggccaacttttcg
cgtcaaagtttccaagcgcaagtcagtcaatgcgtcacactattgcaaaaagtcacctcg
gttggtgtcctctggctgggcgcccagatggtgatgtctttggaattgacgattggtcag
ttgattgcgtttaatatgatggtcaaccatgtgagtcagcccctcgccaaactcgtagaa
ctttggcagcagtttatccaaacacgcgttgccgtcgacaacctgagtgaaatgctcaat
ctgcctgcggaacaagagatgggcgagttccaacctaacgcaccaatccaagggcacatc
gagtttcaacaagtgtggtttcgctaccagccgcaactggcaccagtgttacatggcctc
tctttaacgatcaaaccgggcgagtctatcggattggtggggccttctggctctggaaaa
agtaccgtgacgcgccttattcaaaaactctacctggccgaaaaaggccaagtcctgatc
gatggtacgccactcaatcaatggtctgctgcggccctcaggcagggcattggcgtggtg
ttgcaagaaaactatttgttccaccgaacggtccgggaaaacatcgccatccgacaaccg
accgcgtcgtttgaggcggtggttgaggctgccaaactcgcaggcgctcacgagttcatc
attaaaatgcccaaaggctatgacaccctgctggcagaagggggggcgtcgttatccggg
ggccagaaacaacgaatcgcgatcgctcgcgcgttaatgacccagccgcgcatccttatt
tttgacgaggccactagcgctttggacgaagagtcccaacgcatcgtcaaccagaacatg
gcgaagatcgcccggggacgaacggtgatcaccgtcgcccatcgcctatcggcggttcag
ggttgcgatcgcatcgcggtcattgaacaaggggaagtgacggagttgggtaaccatcaa
cacttgttagcccaacaaggctgctacgcccggttatggcatatccagcaaaacaaacaa
gtggaatctgtaggtgaagaggtgttgccatgttcccaatcatag
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