Vibrio campbellii ATCC BAA-1116: VIBHAR_06502
Help
Entry
VIBHAR_06502 CDS
T00589
Name
(GenBank) hypothetical protein
Organism
vha
Vibrio campbellii ATCC BAA-1116
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF3686
AAA_5
AAA
RuvB_N
AAA_22
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
ABU74393
UniProt:
A7N4W6
LinkDB
All DBs
Position
II:complement(1654025..1658887)
Genome browser
AA seq
1620 aa
AA seq
DB search
MSDMTQKAVSDAGAYDVLKTRLLQQGSQLKSLSQSFNQQRQETFGGQDFKLIGKVNVQTD
AKCIPIDMAQVNQHLLFGYHVQVGMKATPSLDDVFGLYHLHENEGTFRVEPLPLESSFLS
DSRFTHELTELFTYYRDAKLSQISRQESTLYIAFQIGMRPEDRKVFRFQINAHSIEYIDS
LGQNALTSVPQHDFDWIPTTRDDHVLGDHPHVSIQDKLFVECVGGDLTIKVEDNTKDGKG
IYREDVEDPHQSVADAHIDYAFVGDLIALRVKPNREKHARYFLYNSVTQSVVRADALEGS
AKTLPEDHGVLYANGYVLSNGEDKQFAFDADQLKFFQQITSPNGEDILYIFFNAVEGYYI
AYTYNLIEKKFEAPMESYGYSLYPDGRWLVFQLSENEEASTIHPMRIWDTPFSTPEHYAK
VNAQTQGSSPLFNLGNTELVRALSSVLSICQLAQSEEVTQAAYEVLIKQCRSTLDHYTWL
NHDYACGIGSAINELMGTTDKIIDEFAKVQQLQKHASSSLDQQKLAVSELIGKIKLTPKE
QANTLLSLLSEVKGQVGVTMSLRQQHYIDEVQVDRLLEELQAQRESLNLHLLTLLQDKKV
YVPFKKQIQKIELQLEEVTKTAEIQKLNEEVETLRHELQIVTEEVTDIETEDPTQATRIL
DLTTEVTSLLNTVSAKLRAKSQSLQSEEAQAEFSAQFKLLSQSVSSAMEQALTPDDCDTQ
LAKLVGQLDKLESRFADFDQFLSEIYSKRDEIQSTLDNHKQQLIAGQQRRVQNLLQAANV
TMSSIEKRVERFDDVAGLNSYFATDAMVLKLQQLSQTIRELGDSVKADSVDSKLKSLQDQ
SLRALRDNQDIFEKGGTVLRLGKHRFSVNQQPLDLSLVDQSGELALHISGTDFYQAVEDK
AFLDLQTVSRLDVASESEEVYRAEYLAYLILHQASINQDGQSLDKLYDALRENKLNELVQ
RFAAPRYREGYVKGIHDHDAVNILRKVLPVYQQAGLLRYSQTARSKAILWLLEQDADQIG
HYQQQAQNAKLLREHLNASQAYQELQKQLVDSLNDDQYEAADYLAQLLSGQDWQIEVSQD
SLSLCEDYLQFRRSLGWQPQPLSFTESFSDHHQWLSAYTAKKQYGQAFVCEAATVAVVNT
LSEKRLASVDFSLVCHVEGLLGEHTRISKGSLELVLDDFIQRNEHHRSSVVPNFEAYLSQ
RAQLLSSAKEDFRLSEFKPRPLTSFVRNKLISESYLPLIGDNFAKQMGTLGDKKRTDLMG
MLLLISPPGYGKTTLIEYIAHKLGLVFMKINGPSIGHQATSLDPADAPDQNAAREIEKIN
LAFEMGNNVLLYLDDIQHTHPEFLQKFISLCDGTRRIEGTWKGKTKTYDMRGKKFAVVMA
GNPYTESGEAFRIPDMLANRADIYNLGDMLSDQKSIFDLSFIENSLTSNNVLAPLATRDL
NDLYRFVRMAEGESIALSEMSHSYSAIESGEIVTTLQKLIMAQQIVLKVNQQYIKSAATA
DQYRVEPPFKLQGSYRNMNKLAEKISSVMTDQEMNTLLQDHYQGEAQTLAAGTEENLLKL
AELRGDMTDEQQARWSEIKEGYQRQQMMGDSEDRAGQVVQQLAMLNQHVARFGRHDQEGS
NT seq
4863 nt
NT seq
+upstream
nt +downstream
nt
atgtcagatatgactcaaaaagcggtgagtgatgctggtgcatacgatgttttaaagacg
cgtttgttgcagcaaggcagccagctaaagtctctctcccaatccttcaatcagcaacgc
caagaaacgtttggcggccaagattttaaattgatcggcaaggtcaatgttcaaaccgat
gctaagtgcattccaatcgatatggctcaggtaaaccagcatttattgttcggttatcat
gtgcaagttgggatgaaagcgacgccttcattagacgatgtgtttgggctttatcacctc
catgaaaatgaagggacatttcgtgttgagccgcttccacttgaatccagttttttatcc
gattcccgttttacccatgaattgacggaactgtttacttactaccgagacgcaaagctt
tctcaaatctctcgtcaagaaagcacgctttatatcgccttccaaattggcatgcgtcca
gaagacagaaaagttttccgttttcagatcaacgctcattctatcgagtacattgattcc
ctaggtcagaacgccttaaccagtgttcctcaacatgattttgattggatcccaacaacg
cgagatgaccacgtgcttggcgatcatccgcacgtgtctattcaagataagttgtttgtt
gaatgtgttggcggggacttaaccatcaaggtcgaagacaataccaaagatggtaaaggt
atctatagagaagacgttgaagacccacaccaaagcgtggctgacgcacacatcgattac
gcgtttgtcggagacttaattgcgctacgagtaaagccaaaccgagaaaagcacgctcga
tacttcctctacaattcagtgactcagtccgtcgtaagggctgatgcattagagggaagc
gcaaaaacgctacctgaagatcatggcgtgctgtacgccaatggctacgtattatcaaat
ggcgaagacaaacagttcgcctttgacgctgaccagctcaagttcttccagcagatcacg
tcaccgaatggagaggacattctttatatctttttcaacgccgttgaaggttattacatc
gcgtacacctacaacttgattgagaagaaatttgaagcaccaatggagagctacggttac
agcttatacccagatggtcgctggttagtgtttcaattgtctgagaatgaagaggcgtcg
accatccacccaatgagaatttgggatacgccattttctaccccagagcactatgcgaaa
gtcaacgcgcaaacccaaggcagcagtccactgttcaatcttggtaatactgagttggtt
cgagcgctgtcttctgttctttcgatttgccaattagcgcagagtgaagaagtaactcaa
gcggcctatgaagtacttatcaagcagtgtcgctcgaccctcgatcactacacttggctc
aatcatgattacgcttgcggaataggcagtgcgatcaatgaactcatggggactaccgat
aagatcatcgatgagtttgccaaagttcagcagttacaaaaacatgcttcaagcagcctt
gatcagcaaaaattggccgtttccgagctcattggcaaaatcaaactgacccccaaagag
caagcgaacacattactgagtttgcttagtgaagtaaaagggcaagtcggtgtgactatg
tcgctccgtcagcaacattacattgatgaagttcaagttgaccgtttgcttgaagaatta
caggcacagcgcgagtcacttaacctgcatttgctcactcttcttcaagacaaaaaagtg
tacgtccctttcaagaagcaaattcaaaaaattgaattacagctcgaagaagtaaccaaa
acggcggagattcagaagcttaatgaagaagtggaaacgcttcgtcatgagctccagata
gtgacggaagaagtcacggacatcgaaaccgaagacccgacacaagcaactcgaatctta
gacctcaccacagaagtaacgtcgctacttaacactgtttcagccaagctaagagcaaaa
tctcaaagcttacaaagtgaagaagctcaagcggaattcagtgctcaatttaagctgctc
agccagtctgtgagcagtgcaatggagcaagcgttaacgccagatgattgtgatacccag
cttgctaagctcgttgggcaattggataagttggagtcgcgcttcgcggatttcgaccag
tttttaagcgagatttattcaaagcgtgatgagatccaatcaacgttggataaccacaag
caacagcttattgcaggtcaacaacgtcgcgtacaaaacttacttcaagctgccaacgtc
accatgagcagcatagaaaaacgcgttgagcgattcgatgatgttgcaggactgaacagc
tactttgctaccgacgcaatggtactcaagctacaacagttgtctcagactattcgtgag
cttggcgacagtgtcaaagcagacagcgttgactcaaaattgaagtcgcttcaagaccaa
tcgctacgtgcattacgagataaccaagacatcttcgagaaaggtggaacggttctgcgc
ttgggcaagcatagatttagcgtcaaccagcaaccacttgacctcagcttggtcgatcaa
agtggtgagttggcgctacacatctccggtacggatttttaccaagcggtagaagacaaa
gcatttcttgatctgcaaaccgtctctcgtttagacgttgcctcagagagtgaggaagtc
tatcgagcggagtatctggcgtacttaatcttgcatcaagcgtctatcaatcaagatggg
cagagcctagataagctttatgatgccttgagagaaaataagttgaacgaacttgttcaa
cgctttgcagcaccacgttatcgagaagggtatgtcaaaggtatccacgatcatgatgcg
gtcaacattttacgtaaagtgctgcctgtttatcagcaagcggggttactgcgttacagc
caaaccgcgcgctcgaaggccatcttgtggctattagagcaagatgctgaccaaataggt
cactatcaacaacaggcgcaaaacgcgaagttattgcgagagcatttaaatgcatcgcaa
gcgtatcaagagctgcaaaaacaactggttgactccctaaatgatgatcaatatgaagcc
gctgactaccttgcgcagctattgagtgggcaagattggcaaatcgaagtgagtcaggat
tccctttctctctgcgaagattatttgcaatttagacgcagtctgggctggcaacctcaa
ccgctcagctttaccgaatcatttagcgatcatcatcagtggttaagtgcgtacactgcg
aaaaagcaatacggtcaggcattcgtatgcgaagcggcgacggtggcagtggtgaatacc
ttgtctgagaaaaggctagccagtgtcgacttttcattagtgtgtcatgtcgaagggtta
ctgggagagcacactcgaattagcaaaggcagtttagagctcgtattggatgactttatt
caaagaaatgaacatcaccgaagctcggtcgttccgaattttgaagcttatctatcccag
cgcgcccagttgttgagttctgctaaggaagatttccgtcttagtgagtttaaacctcgc
ccattaacgtcatttgtgcgcaacaagctgatcagtgagagctacttacctcttattggc
gacaactttgctaagcaaatgggcacgttaggcgataaaaagcgtactgacttgatgggg
atgctacttcttatctctccgcctggttatggtaaaacgacgttaattgagtatattgca
cacaaattaggtttggtgttcatgaagatcaatggcccatccatcggtcatcaagcgaca
tctctcgaccccgctgacgcccctgatcaaaatgcggcgcgcgaaattgagaaaattaac
ctcgctttcgagatgggcaacaatgtgttgctgtacttggatgatattcaacacacccat
cccgaattcttacagaaattcatctcactctgtgatggcacgcgtcgcatagaaggcact
tggaaagggaaaacgaaaacctacgacatgcgcggcaaaaagtttgctgtcgtgatggcg
ggtaacccgtacaccgagagtggcgaagcgttccgaatcccagacatgttggctaaccgt
gcggacatctacaacctcggtgatatgctctctgaccagaaatcgatcttcgatttaagc
tttatcgaaaactcgctcacctccaacaacgtgcttgcgcctttagcaacgcgagacctg
aatgatttgtaccgctttgtcagaatggcagagggagaaagcatcgcgctgagtgagatg
agccattcttattctgcgatcgaatcgggcgagatcgtgacaaccttgcaaaaactgatc
atggcgcagcaaattgtcttgaaggtgaatcagcagtacatcaagtcagccgcgacagcg
gatcagtatcgtgtcgaacctccgttcaagctgcaaggctcgtatcgaaacatgaataaa
ctggcggagaaaatctcgtcagtgatgactgaccaagagatgaatacgctgcttcaagat
cactatcagggtgaagcacaaacgctggccgcgggcactgaggaaaacctactcaagctt
gcagagctacgtggtgacatgacggatgaacagcaagcacgttggtctgaaatcaaagaa
gggtatcagcgtcagcaaatgatgggtgattccgaagaccgagcaggacaggttgtgcag
caacttgctatgttgaatcagcatgttgctcgatttggtcgtcatgatcaggaggggagc
taa
DBGET
integrated database retrieval system
