Virgibacillus halodenitrificans: BME96_00600
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Entry
BME96_00600 CDS
T04548
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
vhl
Virgibacillus halodenitrificans
Brite
KEGG Orthology (KO) [BR:
vhl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vhl03400
]
BME96_00600
DNA repair and recombination proteins [BR:
vhl03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
BME96_00600
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_25
ATPase
Zn_ribbon_LapB
ChlI
Lon_C
DnaB_C
Rad51
NTPase_1
AAA_22
AAA_16
AAA
NACHT
nSTAND3
AAA_5
AAA_24
AAA_30
AAA_14
KTI12
SLFN-g3_helicase
GvpD_P-loop
ATPase_2
ABC_tran
TIP49
NPHP3_N
RecA
Isochorismatase
TK
Elong_Iki1
KdpD
ATP-synt_ab
MCM
DAP3
DUF7125
AAA_19
zf-RING_10
DUF7129
Motif
Other DBs
NCBI-ProteinID:
APC46786
UniProt:
A0AAC9IU02
LinkDB
All DBs
Position
118934..120307
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AA seq
457 aa
AA seq
DB search
MAKRKTKYVCQECGYESAKWMGKCPGCNNWNTLVEEVAATGGRGNHTFNVGGKPAGKPES
ITSIESQKEPRITTTMKEFNRVLGGGIVLGSLVLIGGDPGIGKSTLLLQISSQLAEKQLP
VLYISGEESTRQTKLRADRLGIKADQLYVLAETNLFDIAKQIEEVKPSLVVVDSIQTVYR
EEVTSAPGSVSQVRESTSELMKIAKTNGIPIFIVGHVTKEGAIAGPRLLEHMVDAVLYFE
GERHHTYRILRGVKNRFGSTNEMGIFEMKEEGLREVMNPSEIFLEERSQGAAGSTVVASM
EGTRPVLVEIQALISPSAFGNPRRMATGIDNNRVPLLMAVLEKRVGLMLQNQDAYIKVAG
GVKLDEPAIDLAVAVSIASSFRDQPTNPEDIFVGEVGLTGEIRRVSRIEQRVQEAAKLGF
KRVICPKNNLEGWTIPKNIEVVGVSTVQEALDIGVSR
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
ttggcaaaaagaaaaacaaagtatgtatgtcaagaatgtggttatgaatcagctaaatgg
atggggaaatgtccgggatgtaacaactggaatacgttggtggaagaagttgcagcaact
ggcgggcgaggtaaccatacattcaatgttggtggaaaacctgcagggaaaccagaaagt
attacttccattgaatcacaaaaggaaccgagaattactacgaccatgaaggaatttaac
cgggtgcttgggggcggaattgttctgggctctcttgtattaattggtggggaccctggg
attgggaaatctaccttgctacttcagatttcttcccaattggcagagaagcaattacca
gttctttatatatcgggcgaggaatctacaagacaaacaaagctacgtgccgatcggtta
ggaattaaggctgatcagctatatgtccttgctgaaacgaacttatttgatatcgctaag
cagattgaagaagtaaagccttctctagttgttgtcgattcgatccaaacagtttatcga
gaagaggtaacaagcgcgccaggaagtgtttcacaagttcgagaatctacaagtgaattg
atgaaaatagcgaaaacaaacggaataccaatttttattgtcggtcatgttacaaaggag
ggcgcaattgctggcccgcgcttattggaacatatggtggatgcagtcctatattttgaa
ggagagcggcaccatacctaccgtatcctgaggggagtaaagaatcgtttcggaagtaca
aacgaaatgggaatttttgaaatgaaagaggaaggtcttcgtgaagtaatgaatccttct
gaaatttttctggaggaaagatctcaaggagctgctggctctaccgttgtagcttctatg
gaaggaacgagacctgtgttggtagaaattcaggctttaatttctccttccgcgtttggt
aatccaagaaggatggctactggcattgataataatcgcgtccctttattaatggctgta
ctggaaaaaagagtagggcttatgctgcaaaatcaggatgcatatataaaagtagctggc
ggagttaaattagatgagccggctattgacttggcagtagcagtgagtattgcttcaagc
tttagggatcaacctacgaatcctgaagatatattcgttggtgaagtaggattaacaggt
gaaataagaagagtatcccgaattgaacaacgtgttcaagaagctgcaaaactaggattt
aaacgtgtgatatgcccaaagaataatcttgaaggctggacgataccgaagaatattgaa
gtagttggtgttagtacggtgcaggaagcactggatataggtgtgagcagatag
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