Virgibacillus halodenitrificans: BME96_04265
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Entry
BME96_04265 CDS
T04548
Name
(GenBank) 3'-5' exoribonuclease YhaM
KO
K03698
3'-5' exoribonuclease [EC:3.1.-.-]
Organism
vhl
Virgibacillus halodenitrificans
Brite
KEGG Orthology (KO) [BR:
vhl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vhl03019
]
BME96_04265
Messenger RNA biogenesis [BR:
vhl03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
BME96_04265
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Motif
Pfam:
HD
tRNA_anti-codon
TraI_2
Motif
Other DBs
NCBI-ProteinID:
APC47428
UniProt:
A0AAC9IXI0
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Position
843430..844377
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AA seq
315 aa
AA seq
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MIKGIGTTAIGESFEGYMLIKDVIKGVTSNGKPFLTLMLRDKTGEIEAKLWDTTKEDEIV
CVPEQIIKLAGEINQFRGKAQLKILSFRPSQPTDDVHVSDFVEKAPIEKEELTEKLTEAI
FEMQNPTLQRLVRAFIRKYQEDLLVYPAATKNHHEYVSGLAHHIVSMLAIARELHKLYPE
MNKDLLYAGIILHDLGKLKELSGIVTTSYTLEGKLLGHIPMMVEEIGLMAKDLQIEGEEV
TILQHLILSHHGKAEWGSPKPPLVREAEVLHLIDLMDAKLNMMNRALSKVKPGEFTERMF
AMDNRSFYKPIFEQK
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atgattaaaggcattggaacaacagctatcggcgagtcttttgaaggatatatgttaatt
aaagatgtaataaaaggagtaaccagtaatggaaaacctttcttaacacttatgctacgt
gataagacaggagagatagaagcaaaactatgggatactacgaaggaagatgaaattgta
tgtgtgcctgagcaaattataaagctggctggggaaataaatcagtttcgagggaaggct
caattaaaaatactttcttttcgtccctcccaaccaacagatgatgttcatgtatctgat
tttgtggaaaaagcaccgatagaaaaagaagaattaactgagaaactaacagaggccatt
ttcgaaatgcaaaatcccactttgcaacggcttgtcagagctttcataagaaaatatcaa
gaagatttattagtgtatcctgcagcgaccaaaaatcatcatgaatatgtatctggattg
gcacatcatatcgtaagtatgcttgcaatcgccagggaattgcacaagctttatcctgag
atgaataaagacttgctatatgctgggattattttacacgatttaggtaagctgaaggag
ctctctggtattgtaacgaccagctatacattggaaggcaagctgcttggtcatatacca
atgatggtggaagaaataggcttgatggctaaagatttgcaaattgaaggtgaagaggta
acaattttacaacatctaatcttatctcatcatggaaaagctgaatggggaagccctaag
ccaccattggtaagagaagcggaagtcttacatttgatcgatttaatggatgcaaaatta
aatatgatgaatcgtgcattaagtaaagtgaaacctggagagttcaccgagcggatgttt
gcaatggataatcgatcgttttataagcctatatttgaacagaaataa
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