Virgibacillus halodenitrificans: BME96_06620
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Entry
BME96_06620 CDS
T04548
Name
(GenBank) hypothetical protein
KO
K01247
DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
vhl
Virgibacillus halodenitrificans
Pathway
vhl03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
vhl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
BME96_06620
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vhl03400
]
BME96_06620
Enzymes [BR:
vhl01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
BME96_06620
DNA repair and recombination proteins [BR:
vhl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
BME96_06620
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
DUF1284
Motif
Other DBs
NCBI-ProteinID:
APC47862
UniProt:
A0AAC9IZI8
LinkDB
All DBs
Position
1272003..1272659
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AA seq
218 aa
AA seq
DB search
MLLINVDSQEVQYLCKNDRELAKVIQLIGDIQIQTRKNYYSSLVQSIIGQLISVKAANTI
RQRVFNACNGEITPEKIDRMDDQTIKKLGFSKQKIASLRDLTERVQNGELPLEELDYLSD
KEIMSRLTAIRGIGPWTAEMFLIFSMQRMNILSLADVGLQRAAKWLYGNNETDGKSLLLD
KSIKWQPYQTIASFYLWRVIDDDHIRKDKEEVIHPKID
NT seq
657 nt
NT seq
+upstream
nt +downstream
nt
atgcttctaataaacgtggatagccaagaggttcagtacctatgtaagaacgatcgtgaa
ctggctaaagttattcagttgatcggagatattcaaattcaaacacgcaaaaattattat
agctcacttgttcaatctattattggtcagctaatttccgtgaaagcagcaaacaccatt
cggcaacgtgtatttaacgcatgtaatggagaaattacgcctgaaaaaatagacaggatg
gatgatcaaacaataaaaaagttaggcttttccaaacaaaaaattgcctcactacgcgat
ttaactgaacgcgtgcaaaatggagaacttcctttggaggaactcgattacctctcagat
aaagagattatgagtagattgactgccattagaggaattggaccatggacagccgagatg
tttctcattttctccatgcaacgaatgaacatactctcacttgccgatgttgggttacaa
cgagctgcaaaatggctttatggaaataacgaaacggatggcaaaagtctgctcctggat
aaatccatcaaatggcagccttatcaaaccattgcatctttttatttatggcgcgttatt
gatgatgatcatataaggaaggataaagaagaagtgatccacccaaagatcgactaa
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