Virgibacillus halodenitrificans: BME96_07570
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Entry
BME96_07570 CDS
T04548
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
vhl
Virgibacillus halodenitrificans
Pathway
vhl03030
DNA replication
vhl03430
Mismatch repair
vhl03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
vhl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BME96_07570
03430 Mismatch repair
BME96_07570
03440 Homologous recombination
BME96_07570
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
vhl03032
]
BME96_07570
03400 DNA repair and recombination proteins [BR:
vhl03400
]
BME96_07570
Enzymes [BR:
vhl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
BME96_07570
DNA replication proteins [BR:
vhl03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
BME96_07570
DNA repair and recombination proteins [BR:
vhl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
BME96_07570
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
tRNA_anti_2
Motif
Other DBs
NCBI-ProteinID:
APC48039
UniProt:
A0AAC9NKT9
LinkDB
All DBs
Position
1455328..1458678
Genome browser
AA seq
1116 aa
AA seq
DB search
MSYTHLQVRTGYSLMNSTITIDKLVNKANELQFNTLALTDENVLYGAVSFYKACVQKGIK
PIIGMVTSILLEDGSLESCILLAKNNIGYHDLMKLSTFLQENKSSHITLDQLSHYTNELF
GIIPAAQSQLTSLIKAEDPDINSYIHTRQAVFPDESFYIGIADHGTEDERIINYKLHHFY
QIQPFPVVALQDVRYLNEKDEVAFDCLQAMKQGKEWDMRLSGPEVRQRYLKSPSEMLGLF
QQTWPEAYKHNQQISANCVVTFDFTKRMIPAYPLNVNEDVHTYLEKECWNRLDRRYQTIT
KEITERLTYELQVIKSMKFSDYFLIVSDFIAYAKKNNILVGPGRGSAAGSLVAYVLGITD
VDPIRFDLLFERFLNPERVTMPDIDIDFSDRRRDEVIDYVKEKYGEKHVAQIITFGTFAA
RSLIRELLKTLNIGQEDSNFVLKNLQGHKRIIDIINESGELKAYVKQSEKLKVLFSIATK
LEGIPRHISTHAAGIVISEEPLMEHIPLTVGANEGLLTQYPMNDLEAVGLLKIDLLGLRN
LTLLEKMKETIYYSTRRRIDLEHLPEQDEKTFQLLKAGNTNGVFQFESQGMQQVLKRLKP
TEFEDLVAVNALYRPGPMDYIPTYINRKHRMEETTYPHPDLAPILSKTYGVLVYQEQIMQ
IAHQIAGFTLGEADILRRAVSKKQQEVMGEQKEAFIKGCLSNGYDKTVAEEIFDWIVKFS
NYGFNRSHAVAYSKISYQLAYFKAHFPAHFFAELLSSIAGQQEKIQQYIKEIKGLGVEVA
PPSINHSFGKYSVEGNKVRIGLLSIKGIGNQVIREIIRIRKDGRFKNIFDFCMRVPLKII
NRKILENLIMAGAFDETYENRASLLASIDQALEQGELFREFNDQPSLFQDKLELEANYVD
IEDFSQFKKLTDEKELVGIYLSSHPLKSYRNKLQQGGFTTLLQAEQLVGRRNSKAGAVIQ
SMKVIRTKRGDSMAFLTLGDETGEMEAVMFPDLYRDVSRWIKEEQLVAITGKVENRSGRL
QWVLGDMKPLDEVELPHVDNRRLFIKLSPHNKEEGLVLIKKIARRYPGTTPVLVYLEHDR
ITYQLKDVAIHPTTECINEMTGHFGKTCVVLDNKSK
NT seq
3351 nt
NT seq
+upstream
nt +downstream
nt
atgtcatacactcatttacaggtgagaacaggttatagcctgatgaacagcactataacc
attgataaattagtaaataaagcaaacgaacttcagtttaatacacttgccttaacagat
gaaaatgtgttgtacggtgctgtctctttttataaagcttgtgtacagaaggggataaag
ccaatcatcggtatggttacaagtattctattagaagacggctcactggagtcctgtatt
ttattagctaaaaataatattggctatcatgatttgatgaagcttagtacattcttgcag
gagaataaaagtagccatataaccttagatcaactatctcactataccaatgaattgttt
ggtattattcctgctgcccaatcacaactgacttctttaataaaggcagaagatcccgat
attaattcctatatccatacaagacaagctgtgtttccggatgaaagtttttatattggc
attgcagatcatggaacagaggatgagagaattattaactacaagcttcatcatttttac
cagattcagccttttcctgtggtagcattacaggatgttcgttatctaaacgaaaaagat
gaagtggcatttgattgcttacaagctatgaagcaggggaaagaatgggatatgcgtttg
tcgggacctgaagtaagacaacgttatttaaaatcaccatcagaaatgctggggctgttc
caacagacttggcctgaggcatataagcataatcagcaaatcagtgctaactgtgtggta
acctttgactttaccaagcgtatgattcctgcctatccattgaatgttaatgaagatgta
catacgtatttggagaaggaatgctggaatcgattagatagaaggtaccaaacaattaca
aaagaaataacggaaagattaacgtatgaactacaagtcattaaatccatgaaattcagt
gattattttttaatcgtgtctgattttatagcatatgcgaaaaaaaataacatactggtg
gggccaggtagagggtcggctgctgggtcgttagtagcatatgtcctaggcattactgat
gtcgatccgatccgttttgatctgctttttgaaaggtttctgaacccggagagagtaaca
atgccagatattgatatagatttttcggatagaagaagagatgaagtaattgattatgtg
aaagaaaaatatggggaaaagcatgttgcacaaatcattacttttggaacatttgcagcg
agatcattaattagggaacttttaaaaacattaaatatcggacaggaagatagtaacttt
gttttaaaaaacctccaaggtcataaacgaattattgacattatcaatgaatcaggcgaa
cttaaagcgtatgttaaacaatcggaaaagttaaaggttttgttttctatagctacaaaa
ttagaaggtattcccagacatatttctacacatgcagcaggaatagtaattagcgaagaa
ccgctcatggaacatattcctttaaccgttggggctaatgaaggactcctgacccaatat
ccaatgaatgatttagaagcagtaggattgttaaaaattgatttattggggttgcgaaat
cttacacttttagaaaaaatgaaagaaacaatttattactccactcgaaggagaatagat
ttggagcatcttcctgaacaggacgaaaagacgtttcaacttctaaaagcggggaataca
aatggggtttttcaatttgaatctcaaggtatgcaacaagtacttaaacgattgaaacca
actgaatttgaagatctcgttgcggttaatgctttgtatcgtcccggtccaatggattat
attcctacttatattaacaggaagcaccgaatggaagagactacctatccacatccagat
cttgcccccattctaagcaaaacgtatggcgtattagtatatcaggaacaaattatgcaa
atagctcatcagattgccggttttacccttggtgaggccgatattttacggagagctgtc
agtaagaaacagcaggaagtgatgggagagcaaaaagaagcgtttattaaaggctgtctg
tctaatggttacgataaaacagtcgcagaggaaatttttgattggattgttaagttttcc
aattatgggtttaaccgaagccatgcggtagcttatagtaaaatttcttatcagctggcc
tattttaaagcgcattttcctgcacatttctttgcagagttattaagttctattgctggt
cagcaagaaaaaatacagcaatatattaaagaaataaaagggcttggagtggaagttgcg
cctccatcgataaatcacagttttggaaaatattctgtggaagggaataaagtacgaatt
gggctgttaagtattaaaggaattggtaatcaagtaattagagagattatccgtattcga
aaagatggacgatttaaaaatatatttgatttttgcatgcgagtacctctgaaaattatt
aatcggaaaatattggagaacctcattatggctggagcttttgatgaaacctatgaaaat
cgggcaagtctgcttgcatccatagatcaggcattggaacaaggagaactattcagggaa
tttaatgatcaacccagcttattccaggacaaattggaattggaagcaaattatgtagac
attgaagactttagccaatttaaaaaattgacagatgaaaaagaattggtaggaatatat
ctatcaagtcatccacttaaaagttaccgaaataaattgcaacaaggagggttcactaca
ctacttcaggcagaacagttggttgggcgaagaaatagcaaagcgggggcagttatccaa
tccatgaaagtgatacgaacgaagcgtggagactccatggcgtttcttaccttaggggat
gagacaggagaaatggaggcggttatgtttccggatttatatcgagatgtgagcagatgg
ataaaggaggaacaactggtagctataacaggtaaggtagaaaacagaagcggtagatta
caatgggtactgggagatatgaagccattggatgaagtggagttgccgcatgttgataac
cgaaggctgtttataaagctctcccctcataataaagaagaagggttagtgcttattaaa
aaaatagcaaggcgatatccagggactactccagttttagtatatttggaacatgatcga
atcacataccaattaaaagatgttgccattcatcccacaactgaatgtataaacgaaatg
acaggccattttggaaaaacatgtgtagttttggataacaagagcaagtaa
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