Virgibacillus halodenitrificans: BME96_08165
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Entry
BME96_08165 CDS
T04548
Name
(GenBank) Holliday junction DNA helicase RuvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
vhl
Virgibacillus halodenitrificans
Pathway
vhl03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
vhl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
BME96_08165
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vhl03400
]
BME96_08165
Enzymes [BR:
vhl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
BME96_08165
DNA repair and recombination proteins [BR:
vhl03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
BME96_08165
RecFOR pathway proteins
BME96_08165
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
TIP49
Mg_chelatase
AAA_16
AAA_14
DUF815
AAA_3
RNA_helicase
nSTAND3
NB-ARC
AAA_17
TsaE
Rad17
AAA_18
AAA_24
NTPase_1
AAA_28
Sigma54_activ_2
NACHT
Resolvase
NPHP3_N
Bac_DnaA
IstB_IS21
AAA_25
ABC_tran
Parvo_NS1
Torsin
Motif
Other DBs
NCBI-ProteinID:
APC48150
UniProt:
A0AAC9IZR4
LinkDB
All DBs
Position
1579661..1580662
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AA seq
333 aa
AA seq
DB search
MDDRVVTGELQNEDASVELSLRPTILKQYIGQQKVKENLSIFIQAAKMREEPLDHVLLYG
PPGLGKTTLAGIIANEMGVQFRSTSGPAIERAGDLAAILSSLEPGDVLFIDEIHRLPRSV
EEVLYPAMEDFFLDIVIGTGPSARSVRIDLPPFTLVGATTRAGLLSAPLRDRFGVLSRLE
FYETKDLCSIVERTAEIFQTSLSKEAAVEVARRSRGTPRIANRLLKRIRDISQVKGEEEI
SFPTTKLALEMLQVDDEGLDHIDHKLLRGIMESFQGGPVGLDTIAATIGEESQTIEDVYE
PYLLQIGFIQRTPRGRVVTTKAYQHFGVKENDQ
NT seq
1002 nt
NT seq
+upstream
nt +downstream
nt
atggatgacagagtggtaacgggtgaattacagaatgaagatgcttctgtggaattaagt
ttacgtccaacgatattaaagcaatatataggacaacagaaggttaaagaaaatttaagt
atcttcatccaggctgccaagatgcgcgaagagccgcttgaccatgtgctgctttacgga
cctcctggtttaggtaagaccacacttgccggcattattgcaaatgagatgggagtacaa
ttccgttcgacttcagggccggctatagaacgcgcaggagatcttgctgcaatactatcc
tcgttggaaccgggggatgttctttttattgatgaaattcatcgattaccacgttctgtg
gaagaagtactatatccggcaatggaggatttctttcttgatattgttatcggtacaggc
ccaagcgctcgttcggtacgaattgacttacctccttttactctggttggtgccacaact
agagcaggcttactctctgctccgctaagagatcgatttggggttttaagcagattagag
ttttatgagacaaaagatttgtgttcaattgttgagagaacagctgaaatttttcaaact
agtcttagcaaggaggctgctgtggaagttgctagaagatccagaggtactcccagaata
gcaaaccgtttattaaaacgaatacgtgatatttcacaagtaaaaggggaagaagaaatc
agtttcccaacaacaaagcttgctttggaaatgcttcaagtagacgatgagggtttggat
catattgatcataagttacttagaggtattatggaaagttttcaaggtggcccagttggt
ctggataccattgcagctaccattggagaagagtcccagactatagaggacgtttatgag
ccttatttgcttcaaattggtttcattcaacggactcctagaggaagagttgttaccaca
aaagcttatcagcattttggggtgaaagagaatgatcaataa
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