Virgibacillus halodenitrificans: BME96_08655
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Entry
BME96_08655 CDS
T04548
Name
(GenBank) deoxyribonuclease IV
KO
K01151
deoxyribonuclease IV [EC:
3.1.21.2
]
Organism
vhl
Virgibacillus halodenitrificans
Pathway
vhl03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
vhl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
BME96_08655
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vhl03400
]
BME96_08655
Enzymes [BR:
vhl01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.2 deoxyribonuclease IV
BME96_08655
DNA repair and recombination proteins [BR:
vhl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
BME96_08655
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AP_endonuc_2
Motif
Other DBs
NCBI-ProteinID:
APC48241
UniProt:
A0AAC9IYM2
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All DBs
Position
1681864..1682757
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AA seq
297 aa
AA seq
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MVKIGSHVSMSGKKMLLGSSEEATSYGANTFMIYTGAPQNTRRKPIEELNITAGREHMEE
NGIEDIIVHAPYIINIGNTIKPATYELGVTFLRNEIERTEAIGARQIVLHPGAHVGEGAD
KGIKKIIEGLNEVLEKDSEVQIALETMAGKGTEIGRTFDEIAKIMDGVTHNGNLSVCMDT
CHIHDAGYDIVEDFDGVLNEFDNIIGLDKLKVIHVNDSKNVQGAHKDRHENIGFGHIGFE
ALHYIVHHPQLKDLPKILETPYVGEDKKNKKPPYKFEIEMLKAGKFNPQLKDIIMQA
NT seq
894 nt
NT seq
+upstream
nt +downstream
nt
ttggtgaagattgggtcacatgtatccatgagcggaaagaaaatgttgttaggatcaagt
gaggaagctacttcctatggtgctaacacctttatgatttatacaggagctcctcaaaat
acgagaaggaaaccgattgaagagttaaatattacggctggaagagaacatatggaagag
aatgggatagaagatataatcgttcatgcaccgtatattataaatattggaaatacaata
aaaccagcaacctatgaacttggagtaacatttttgagaaatgaaattgaaagaaccgaa
gcaattggtgcaagacaaattgtgcttcacccaggtgcgcatgtaggtgaaggagcggat
aagggaataaaaaagattatcgaagggttaaatgaagtacttgaaaaagatagtgaagta
caaattgctttagaaacaatggctggaaaaggaaccgaaataggtagaacttttgatgaa
atcgcaaaaatcatggatggtgtgactcacaacggaaatttgtctgtatgtatggataca
tgccacattcatgatgctggttatgatattgtggaagatttcgatggggttttaaatgag
tttgataacatcattggattagacaaactaaaagtgattcatgtgaatgatagtaaaaat
gttcagggagctcataaagacagacatgagaatattggctttggtcatattggttttgaa
gcattacattatattgttcatcaccctcagctgaaagatttaccaaaaatcctggaaaca
ccttatgttggtgaagacaagaaaaacaaaaagccgccttataagtttgaaattgaaatg
cttaaagccggaaaatttaatccgcagttaaaagatataattatgcaagcatag
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