Virgibacillus halodenitrificans: BME96_10175
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Entry
BME96_10175 CDS
T04548
Name
(GenBank) TetR family transcriptional regulator
KO
K22108
TetR/AcrR family transcriptional regulator, cholesterol catabolism regulator
Organism
vhl
Virgibacillus halodenitrificans
Brite
KEGG Orthology (KO) [BR:
vhl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vhl03000
]
BME96_10175
Transcription factors [BR:
vhl03000
]
Prokaryotic type
Helix-turn-helix
TetR/AcrR family
BME96_10175
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Gene cluster
GFIT
Motif
Pfam:
TetR_C_24
TetR_N
TetR_C_4
HTH_Tnp_1_2
DUF6262
DNA_pol_lambd_f
Motif
Other DBs
NCBI-ProteinID:
APC48517
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Position
complement(1955565..1956182)
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AA seq
205 aa
AA seq
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MRTELRQKIIQSALLLFEKQGYHGVTVNQIVEDVGTSKGGFYHHFKTKDELLYVIHDTFI
SYALEKATKANDMHDSPTKKLQAIIHDFVKVFDIYKPHISVFYQENIYLNEEYEILIKKK
RDQFKNIIMKALYEGKEQGEFRSDLQVDITGMAILGMVNWTYKWYHQGGFRTIDDISNIF
VDLILHAVLESETITSGKYKELLMK
NT seq
618 nt
NT seq
+upstream
nt +downstream
nt
attagaacggaattacgtcaaaaaattatccagtctgctttacttttattcgaaaaacaa
ggctaccatggtgtcactgtaaatcaaattgtggaagatgtcggcacatcaaaaggtgga
ttttatcatcactttaaaacaaaagatgaactactatatgttatccacgacacattcata
tcttatgctttggagaaggcaacaaaagcgaacgacatgcatgactcaccaaccaagaag
ctccaagccattatccatgactttgtaaaagtatttgacatttacaaaccacatatctct
gttttttatcaggaaaatatttatttgaatgaggaatacgaaatattaattaaaaagaaa
agagatcaatttaaaaacattattatgaaagcgctttatgaagggaaggaacaaggagaa
ttcagatcagatcttcaggttgatattactggaatggcaatattaggaatggtcaattgg
acatataaatggtatcaccaaggtggatttagaaccattgatgacataagtaatatattt
gttgatttaattctacatgccgtattggaatctgaaactatcacaagtggcaaatacaag
gaattgttaatgaaataa
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