KEGG   Virgibacillus halodenitrificans: BME96_10390
Entry
BME96_10390       CDS       T04548                                 
Name
(GenBank) ribonuclease Y
  KO
K18682  ribonucrease Y [EC:3.1.-.-]
Organism
vhl  Virgibacillus halodenitrificans
Pathway
vhl03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:vhl00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    BME96_10390
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:vhl03019]
    BME96_10390
Messenger RNA biogenesis [BR:vhl03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     BME96_10390
SSDB
Motif
Pfam: RNase_Y_N HD KH_1 HDOD KhpA-B_KH KH_2 Exonuc_VII_L DUF3450
Other DBs
NCBI-ProteinID: APC48560
LinkDB
Position
complement(1999655..2001220)
AA seq 521 aa
MDNPLIISILLALFLIVGIVVGYLIRKSIAEAKISSAETLAKQIVDEAHRNADAAKKEAL
LEAKDENHRLRQQTEEELRDRRNEVQKQENRLMQKEENLDRKSETLDKRELLLEKKEQSL
TEKQQQIEEMESKVETTLQEQQTELERISGYTTDQARQVILERIEKEVAHESALMIKEAE
NRAKEEADKKAKNILSLALQRCAADHVAETTVSVVNLPNDEMKGRIIGREGRNIRTLETL
TGIDLIIDDTPEAVILSGFDPIRRETARMALEKLVQDGRIHPARIEEMVDKARREVDEYI
REIGEETTFEVGVHGLHPDLIKILGRLKYRTSYGQNVLKHSTEVAYLAGLLAAELGEDVT
LARRAGLLHDIGKAIDHEVEGSHVEIGKELAMKYKEHEVVINSIASHHGDEEPTSIISVL
VAAADALSAARPGARSETLENYIKRLEKLEEISESFAGVEKSFAIQAGREIRIMVKPDEI
DDIESVRIARDIRKRIEGELDYPGHIKVTVIRETRSVEYAK
NT seq 1566 nt   +upstreamnt  +downstreamnt
atggacaatcctttaatcatctccattttgcttgctctattcctaatcgtcggtattgtt
gttggttatctgattcgtaaatctattgcggaagctaaaatttctagtgcagagacgtta
gctaaacaaatagtagatgaggcacaccgaaatgcagatgccgctaaaaaagaggcactt
cttgaggcgaaggatgaaaatcacagacttcgtcagcagacagaagaggaattgcgtgac
cgccgaaacgaagttcaaaagcaagaaaatcgtctgatgcaaaaagaagaaaatctggac
agaaaaagtgaaacactggacaagcgtgagctcttgttagagaagaaagaacaatcacta
acagaaaaacaacaacaaattgaagaaatggaaagcaaagtggaaactacattacaagag
cagcaaacggagcttgagcgcatttcaggatatacaactgaccaggctagacaagttatt
ttagagcggattgaaaaagaagtagctcatgaatcggctttaatgattaaagaagcagaa
aaccgtgcaaaagaagaagctgataaaaaggctaaaaatattctttcgttggcactccaa
cgttgtgctgcagatcatgttgcagaaacaactgtttcagttgttaacttgccaaatgat
gaaatgaaaggacgtattattggccgtgaaggaagaaatatacgaaccttggaaacactg
acaggtattgatttaatcatcgatgatacaccagaggcagtgattttatccggttttgat
cctattcgaagagaaacagctcgtatggctttagagaaacttgttcaagacggcagaatc
catcctgctcgtattgaggagatggtagataaagcacgtcgtgaagtggatgagtatata
cgtgaaataggggaagagacaacttttgaagtaggagtacacggtctgcatccggatcta
ataaaaattctcggtcgtctaaaatatcggactagctatggacaaaatgtattgaagcac
tctacagaggttgcatatcttgctgggctgcttgctgctgaattaggtgaagatgttacc
ttagcaagaagagccggattactacatgatattggtaaagcaattgatcatgaagtggaa
ggtagtcatgtggagatcggtaaagagcttgcaatgaaatataaggagcacgaagtagtc
attaattcaattgcttctcaccatggggacgaggaacctacttccattatctctgtacta
gttgctgctgctgatgcattatctgcagcaagaccaggtgcacgaagtgaaacattagaa
aactatatcaaacgtttagagaaactggaagaaatttctgaatcatttgccggggttgag
aaatcattcgcaattcaagcaggtagagaaatccgaattatggttaaacctgatgaaatt
gatgacattgaatctgttcgaattgcccgagatatacgaaagcgaatcgagggagagctt
gattatcccggtcatataaaagttactgttattcgagaaacgagatcagtagagtatgca
aaataa

DBGET integrated database retrieval system